Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is fhuF [H]
Identifier: 116689659
GI number: 116689659
Start: 1804216
End: 1805016
Strand: Direct
Name: fhuF [H]
Synonym: Bcen2424_1637
Alternate gene names: 116689659
Gene position: 1804216-1805016 (Clockwise)
Preceding gene: 116689658
Following gene: 116689660
Centisome position: 51.79
GC content: 71.29
Gene sequence:
>801_bases ATGACGCCGGCGCTCGACGGCGCGCGCGCCACGCGCTTTTCGGCGTTCGCGCCGCAACCGTTCGCCGAGCACCTCGACAT CGTCTGGCTCGGCATGCCCGACGATGTGCACGCGCCGGGCCGCGTCGTCGTGCCTGTCAGCGCGTTGCCCGCGCACCGCG ACGCCATGCTCGGCGCGATGGTCGACCATTACGGCGGCGATCCGGCGCAGCATGCGCGCGCGCTGATGTCGCAATGGAGC AAATATTATTTCGGCCGCGCGGCGCCGGCCGGCGTCGTCGCCGCGCTGACGCTCGGCCGGCCGCTCGACATGACGCCCGA GCGCACGTTCGTCGCGCTCGACGACGGGATGCCGGCCGCGCTGTATTTCGCGAGCGACGCGCTCGGCGCGCCGTGCGACG ATCCCGCGCCGCGCTATGCGGGGCTCATCGCCCATCTCGGCGCGGTGATCGACCTGCTCGCGGCGATGGGCCGCGTCACG CCGCGCGTGCTGTGGAGCAACGCGGGCAACCTGCTCGACTATCTGCTCGAGACGTATCGTTCGCTGCCGTGCGCGGCCGA TCCCGTGGGGGACGCGAACTGGCTGTTCGGTTCGACCTGCGTGCGCGGCGAATCGAATCCGCTGCGCATGCCGGTGCGCG ATGCCGTGCCGCGCTCGCCGCTGCTGCCGACGCCGTTTCGCGCGCGCCGCGTGTGCTGCCTGCGCTACGAAATTCCTGGA GAAACGCAACTGTGTGGAAGCTGCCCCCTGCTACTGACGATGGACGACGCGGCGCTGGCCGAGCAGGACGCGATCCGGTG A
Upstream 100 bases:
>100_bases CGCGCGAGGTGCCGGCCGGCGTGCTGACCGCGCTGATCGGCGCGCCGTACCTGCTCGGTCTGCTGATTCTCGAGGGGCGC CGCGCCCGGCGCGCGGGGCG
Downstream 100 bases:
>100_bases CGCACGCCGGCCGCCGGCACGCGCTCGGTGCACTCGCGGCAGCGCTTGGCGCCGCGTGCTGCGGCGCGTTTTCCGCATCG GCGGCGGCCGCCTCCGTGGC
Product: ferric iron reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTPALDGARATRFSAFAPQPFAEHLDIVWLGMPDDVHAPGRVVVPVSALPAHRDAMLGAMVDHYGGDPAQHARALMSQWS KYYFGRAAPAGVVAALTLGRPLDMTPERTFVALDDGMPAALYFASDALGAPCDDPAPRYAGLIAHLGAVIDLLAAMGRVT PRVLWSNAGNLLDYLLETYRSLPCAADPVGDANWLFGSTCVRGESNPLRMPVRDAVPRSPLLPTPFRARRVCCLRYEIPG ETQLCGSCPLLLTMDDAALAEQDAIR
Sequences:
>Translated_266_residues MTPALDGARATRFSAFAPQPFAEHLDIVWLGMPDDVHAPGRVVVPVSALPAHRDAMLGAMVDHYGGDPAQHARALMSQWS KYYFGRAAPAGVVAALTLGRPLDMTPERTFVALDDGMPAALYFASDALGAPCDDPAPRYAGLIAHLGAVIDLLAAMGRVT PRVLWSNAGNLLDYLLETYRSLPCAADPVGDANWLFGSTCVRGESNPLRMPVRDAVPRSPLLPTPFRARRVCCLRYEIPG ETQLCGSCPLLLTMDDAALAEQDAIR >Mature_265_residues TPALDGARATRFSAFAPQPFAEHLDIVWLGMPDDVHAPGRVVVPVSALPAHRDAMLGAMVDHYGGDPAQHARALMSQWSK YYFGRAAPAGVVAALTLGRPLDMTPERTFVALDDGMPAALYFASDALGAPCDDPAPRYAGLIAHLGAVIDLLAAMGRVTP RVLWSNAGNLLDYLLETYRSLPCAADPVGDANWLFGSTCVRGESNPLRMPVRDAVPRSPLLPTPFRARRVCCLRYEIPGE TQLCGSCPLLLTMDDAALAEQDAIR
Specific function: Involved in the reduction of ferric iron in cytoplasmic ferrioxamine B [H]
COG id: COG4114
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790829, Length=204, Percent_Identity=30.8823529411765, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008090 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF [H]
EC number: NA
Molecular weight: Translated: 28550; Mature: 28419
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPALDGARATRFSAFAPQPFAEHLDIVWLGMPDDVHAPGRVVVPVSALPAHRDAMLGAM CCCCCCCCCHHHCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHH VDHYGGDPAQHARALMSQWSKYYFGRAAPAGVVAALTLGRPLDMTPERTFVALDDGMPAA HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEE LYFASDALGAPCDDPAPRYAGLIAHLGAVIDLLAAMGRVTPRVLWSNAGNLLDYLLETYR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH SLPCAADPVGDANWLFGSTCVRGESNPLRMPVRDAVPRSPLLPTPFRARRVCCLRYEIPG CCCCCCCCCCCCCEEECCEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHEEEEEEEECCC ETQLCGSCPLLLTMDDAALAEQDAIR CCCCCCCCCEEEEECCHHHHHHHCCC >Mature Secondary Structure TPALDGARATRFSAFAPQPFAEHLDIVWLGMPDDVHAPGRVVVPVSALPAHRDAMLGAM CCCCCCCCHHHCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHH VDHYGGDPAQHARALMSQWSKYYFGRAAPAGVVAALTLGRPLDMTPERTFVALDDGMPAA HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEE LYFASDALGAPCDDPAPRYAGLIAHLGAVIDLLAAMGRVTPRVLWSNAGNLLDYLLETYR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH SLPCAADPVGDANWLFGSTCVRGESNPLRMPVRDAVPRSPLLPTPFRARRVCCLRYEIPG CCCCCCCCCCCCCEEECCEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHEEEEEEEECCC ETQLCGSCPLLLTMDDAALAEQDAIR CCCCCCCCCEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9990318 [H]