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The map label for this gene is fecI [C]

Identifier: 116689654

GI number: 116689654

Start: 1799235

End: 1799903

Strand: Direct

Name: fecI [C]

Synonym: Bcen2424_1632

Alternate gene names: 116689654

Gene position: 1799235-1799903 (Clockwise)

Preceding gene: 116689651

Following gene: 116689655

Centisome position: 51.64

GC content: 71.9

Gene sequence:

>669_bases
ATGGCCATGGCGGAAGTGCTCGACCGACCGGCGGCGGCAGCGGCAAACCCGTTTCTCGGCAGTTATCCGGACCTGCCGCC
GCGCGCCGCGCCGCGTGCGCGCCGGGCGTCCCAGCCCGCTGCGCAGGGCGCGCTGCTCGACGTGCTGATCTCGCATCGCG
CGATGCTGGTCAACGTCGCGCGCGGCTTCGTCGGCTGCGCGAGCCGTGCGGAAGACGTCGTGCACGACGTGTTCGTGAAG
CTCGTCGAATTCCCGAACCAGGACGCGGTGCGCCAGCCGGTCGCGTACGTGACGCGGATGGTGCGCAATGCGTCGATCGA
CGCGTGCCGCCGGCAAAGCCTCGAAAACGTCTATCACACGGAAGAGGACGACGGCTTCGACGTGCCGTCGCCCGAGCCGA
CGCCGGAAGCCGCGCTGATGACGCGCGATACGCTGCGGCGCGTGTGGGCCGCGCTCGACGACCTGCCGGCGCGCAGCCGG
GCGGCGTTCGAGATGGTGCGGCTGCGCGAGGAGACGCTGCAGACCGCGGCGCGCGCGCTGAACGTGTCGCAGACGCTCGT
GCATTTCATGGTGCGCGACGCGGAGCGTCACTGCGCGGAATGCCTCGACGCGTGCCATCGCGGCGTCGCGTGCCCGGTGT
TCCTGGGCGGCCGCGCGCGGCGGCGGTAA

Upstream 100 bases:

>100_bases
GACAAATCCCGACAACCGAAAGGGGCATCCTGTAATCGGATTGAGAATGATTTGCGTTTACGTTAAATTGCGCTATCTCG
GAATTTGACGGAGCAGATCG

Downstream 100 bases:

>100_bases
AAAAACGCGCCGGCCAACCGTCTATCAGACAGGAGCGGCCGAATTCGCCGCTTCGCCTCCTTCAACCGCCCAGCGATTTC
CGATCATGACGCAAGCTCCG

Product: extracytoplasmic-function sigma-70 factor

Products: NA

Alternate protein names: Extracytoplasmic-Function Sigma-70 Factor; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Subfamily RNA Polymerase Sigma-70 Factor; Sigma-; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; Sigma Factor; RNA Polymerase Sigma-70 Family Protein; RNA Polymerase Sigma Factor FECI Protein; Ferric Regulator Sigma-24 Subunit; ECF Family RNA Polymerase Sigma Factor; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; RNA Polymerase Sigma Factor Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAMAEVLDRPAAAAANPFLGSYPDLPPRAAPRARRASQPAAQGALLDVLISHRAMLVNVARGFVGCASRAEDVVHDVFVK
LVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSR
AAFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR

Sequences:

>Translated_222_residues
MAMAEVLDRPAAAAANPFLGSYPDLPPRAAPRARRASQPAAQGALLDVLISHRAMLVNVARGFVGCASRAEDVVHDVFVK
LVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSR
AAFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
>Mature_221_residues
AMAEVLDRPAAAAANPFLGSYPDLPPRAAPRARRASQPAAQGALLDVLISHRAMLVNVARGFVGCASRAEDVVHDVFVKL
VEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRA
AFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24511; Mature: 24380

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAEVLDRPAAAAANPFLGSYPDLPPRAAPRARRASQPAAQGALLDVLISHRAMLVNVA
CCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGFVGCASRAEDVVHDVFVKLVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRAAFEMVRLREETLQTAARAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC
>Mature Secondary Structure 
AMAEVLDRPAAAAANPFLGSYPDLPPRAAPRARRASQPAAQGALLDVLISHRAMLVNVA
CHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGFVGCASRAEDVVHDVFVKLVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRAAFEMVRLREETLQTAARAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA