Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689604
Identifier: 116689604
GI number: 116689604
Start: 1743890
End: 1744432
Strand: Direct
Name: 116689604
Synonym: Bcen2424_1582
Alternate gene names: NA
Gene position: 1743890-1744432 (Clockwise)
Preceding gene: 116689603
Following gene: 116689605
Centisome position: 50.06
GC content: 67.22
Gene sequence:
>543_bases ATGAACGACGAACGCGAAACGACGGATTCGGGCTGGCACGTCGATCTCGTCGACGGAACGGTCACCGGTTCGTTGCCGGT CACGCTGGCAGTCGACAGCCGGAGCCTGAAAAGCAGGGCGGCCGTGTGTGCAGGGCTCGCCGCGGCGACCTTGTGTGGTT ATGTGGCCGCCCCGACGCTCTGGCCGGTAGCGGCGCTGGCCGTGTTGCTGGCGCTGGCCAGTGCCGCGTTGTTCGTCTCG TCGCGGCGCAAGCTCGCGCTGCAGGTCGACGAGACGGGCTTCCGGCTAATCGGCTCCGCGCGCGAAAAACCCGTCACGCC GTGGCGTGACGTCACTGAATTCCGGATCGTCAGCGTTGCCGGAAATCGTTACATCGGCTATCAGTTCTCCGCCCATTCGT CGCGCACGAAGGTGCCGGGCGGCGTGATGCTGCCGATCGCGCGATTTGCCGATCTTCCGCTCGACGCGGTGGCCGCGTTG CTGGAGGCCTGCCGCCGTCAATTCGGCCAGCCGGACGAACCGGCCGGCCGAACGGGCCGATGA
Upstream 100 bases:
>100_bases ACGTCGGCGCAATGGCGCGTGATTCGCGCAAACGGGATCGGAATCCCGGCGTGCCGCCCGCGCCGATGGGCCGGCGGCCG TCGACACGAGCCAGCGGGCA
Downstream 100 bases:
>100_bases CGCCCGATGCGGCGTCCTGCGCCTCCATCAGTCAGGCGAACAAAAAAATCCTGGGCACCGTGTCGATTTCCGGCGGCGTC GTCCGTCGTAGCATCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNDERETTDSGWHVDLVDGTVTGSLPVTLAVDSRSLKSRAAVCAGLAAATLCGYVAAPTLWPVAALAVLLALASAALFVS SRRKLALQVDETGFRLIGSAREKPVTPWRDVTEFRIVSVAGNRYIGYQFSAHSSRTKVPGGVMLPIARFADLPLDAVAAL LEACRRQFGQPDEPAGRTGR
Sequences:
>Translated_180_residues MNDERETTDSGWHVDLVDGTVTGSLPVTLAVDSRSLKSRAAVCAGLAAATLCGYVAAPTLWPVAALAVLLALASAALFVS SRRKLALQVDETGFRLIGSAREKPVTPWRDVTEFRIVSVAGNRYIGYQFSAHSSRTKVPGGVMLPIARFADLPLDAVAAL LEACRRQFGQPDEPAGRTGR >Mature_180_residues MNDERETTDSGWHVDLVDGTVTGSLPVTLAVDSRSLKSRAAVCAGLAAATLCGYVAAPTLWPVAALAVLLALASAALFVS SRRKLALQVDETGFRLIGSAREKPVTPWRDVTEFRIVSVAGNRYIGYQFSAHSSRTKVPGGVMLPIARFADLPLDAVAAL LEACRRQFGQPDEPAGRTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19137; Mature: 19137
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDERETTDSGWHVDLVDGTVTGSLPVTLAVDSRSLKSRAAVCAGLAAATLCGYVAAPTL CCCCCCCCCCCCEEEEECCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHH WPVAALAVLLALASAALFVSSRRKLALQVDETGFRLIGSAREKPVTPWRDVTEFRIVSVA HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEEEEC GNRYIGYQFSAHSSRTKVPGGVMLPIARFADLPLDAVAALLEACRRQFGQPDEPAGRTGR CCEEEEEEECCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNDERETTDSGWHVDLVDGTVTGSLPVTLAVDSRSLKSRAAVCAGLAAATLCGYVAAPTL CCCCCCCCCCCCEEEEECCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHH WPVAALAVLLALASAALFVSSRRKLALQVDETGFRLIGSAREKPVTPWRDVTEFRIVSVA HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEEEEC GNRYIGYQFSAHSSRTKVPGGVMLPIARFADLPLDAVAALLEACRRQFGQPDEPAGRTGR CCEEEEEEECCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA