Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689555

Identifier: 116689555

GI number: 116689555

Start: 1694393

End: 1695310

Strand: Reverse

Name: 116689555

Synonym: Bcen2424_1533

Alternate gene names: NA

Gene position: 1695310-1694393 (Counterclockwise)

Preceding gene: 116689556

Following gene: 116689553

Centisome position: 48.66

GC content: 65.9

Gene sequence:

>918_bases
ATGAACGAAGGAATGAAGCGCCACGCACGGCATGTCGCCACGGCGGCCGTCGCGTGCGTGCTGTCGCTCGCGCAGGCAAG
CCTGCATGCACAGGAAACGGCCGGCGCCGCGAGCGCGGCCCAGGCCACCGCGCTGCCGGCGGATCTCGCGAAAGTCACGC
ACGAGCCGCTCGCGCAACAGGCGCGCTGGCTGCGCACGGCGGCTCAGCGCGGCACGCTCGCGCAACTCGACGACGCGACG
CTCACCGCGCTCTTCAAGGCGCTCGATCCGCTCGCCGTGCCGCTCTATATCCGCAATGGCCCGAACGGCTATCCGTCCTA
CCAGTTCACGATGGTGCGCCAGGAGCGCATCAGCGGAAAATGGTCCGACACGCCCGACCGCATGCTCGTGAAGACGACCC
GCGAGCCGCTGCGCGTGTATGCGAAATGGCTGCCGGGCGGCGCGCATGCCGGCCAGGAGACCATCTACGACACGACGCAG
CGCAAGGACGAGATGTATGGCCATCTCGGCGGCCTGCTCGGCAAGATTCCGCTGTGGACGGCGATCGACGGCGCGTTGGC
GCGCGCGCAGTCGAATCACCAGGTGAAGGATCTCGGCACCGAGTTCATTGCGAACCTGTACCTGACCGAAGGGAAGAAAT
ACCTGGAAGCCGGCGTGCAGCGCCCGACCGACGTGGAAGCCAAAACGATCGGCGGTGTGCGCGTCGTCGCGCTCACCTAC
GAAACGCCGACCGGCCGGCCGCAGTTCTATGCGAAAAAGGAAGTGCTGGGGCTCGACCTGCACGCACCCTATTTCCGGAC
CGTCGAATCCTATGACAACGACGGCAGGATCTTCGAGCGGATCGTCATCGAGAAAATCGCGCCGGCGACCCTCGACGACA
CCGCATTCGACCCGAAAAACCCCGACTACGCGTTCTGA

Upstream 100 bases:

>100_bases
TCGGCAAGATCCTGCGCCGCGCGCTGCGCGACGAGGAACTCGCCAAAATCAACGCCGCGAAGCAAGGCTGAACGATCCAT
CGCCCCGGGAGACGCTGTCG

Downstream 100 bases:

>100_bases
CGCGCGCCGGCGGGGCGGTCACGGGCTCAATCGTCATCGTCGTCGCCGTGGTGTCGACGCCAGTGCTTGTAATAGTGCTT
GCGCCACTTGCGGTAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein Transmembrane

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNEGMKRHARHVATAAVACVLSLAQASLHAQETAGAASAAQATALPADLAKVTHEPLAQQARWLRTAAQRGTLAQLDDAT
LTALFKALDPLAVPLYIRNGPNGYPSYQFTMVRQERISGKWSDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTQ
RKDEMYGHLGGLLGKIPLWTAIDGALARAQSNHQVKDLGTEFIANLYLTEGKKYLEAGVQRPTDVEAKTIGGVRVVALTY
ETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIEKIAPATLDDTAFDPKNPDYAF

Sequences:

>Translated_305_residues
MNEGMKRHARHVATAAVACVLSLAQASLHAQETAGAASAAQATALPADLAKVTHEPLAQQARWLRTAAQRGTLAQLDDAT
LTALFKALDPLAVPLYIRNGPNGYPSYQFTMVRQERISGKWSDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTQ
RKDEMYGHLGGLLGKIPLWTAIDGALARAQSNHQVKDLGTEFIANLYLTEGKKYLEAGVQRPTDVEAKTIGGVRVVALTY
ETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIEKIAPATLDDTAFDPKNPDYAF
>Mature_305_residues
MNEGMKRHARHVATAAVACVLSLAQASLHAQETAGAASAAQATALPADLAKVTHEPLAQQARWLRTAAQRGTLAQLDDAT
LTALFKALDPLAVPLYIRNGPNGYPSYQFTMVRQERISGKWSDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTQ
RKDEMYGHLGGLLGKIPLWTAIDGALARAQSNHQVKDLGTEFIANLYLTEGKKYLEAGVQRPTDVEAKTIGGVRVVALTY
ETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIEKIAPATLDDTAFDPKNPDYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33520; Mature: 33520

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEGMKRHARHVATAAVACVLSLAQASLHAQETAGAASAAQATALPADLAKVTHEPLAQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHH
ARWLRTAAQRGTLAQLDDATLTALFKALDPLAVPLYIRNGPNGYPSYQFTMVRQERISGK
HHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEHHHHCCCC
WSDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTQRKDEMYGHLGGLLGKIPLWT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AIDGALARAQSNHQVKDLGTEFIANLYLTEGKKYLEAGVQRPTDVEAKTIGGVRVVALTY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCEEEEEEEE
ETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIEKIAPATLDDTAFDPKN
ECCCCCCCCEEHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDYAF
CCCCC
>Mature Secondary Structure
MNEGMKRHARHVATAAVACVLSLAQASLHAQETAGAASAAQATALPADLAKVTHEPLAQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHH
ARWLRTAAQRGTLAQLDDATLTALFKALDPLAVPLYIRNGPNGYPSYQFTMVRQERISGK
HHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEHHHHCCCC
WSDTPDRMLVKTTREPLRVYAKWLPGGAHAGQETIYDTTQRKDEMYGHLGGLLGKIPLWT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AIDGALARAQSNHQVKDLGTEFIANLYLTEGKKYLEAGVQRPTDVEAKTIGGVRVVALTY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCEEEEEEEE
ETPTGRPQFYAKKEVLGLDLHAPYFRTVESYDNDGRIFERIVIEKIAPATLDDTAFDPKN
ECCCCCCCCEEHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDYAF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA