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The map label for this gene is 116689538

Identifier: 116689538

GI number: 116689538

Start: 1677316

End: 1679004

Strand: Reverse

Name: 116689538

Synonym: Bcen2424_1516

Alternate gene names: NA

Gene position: 1679004-1677316 (Counterclockwise)

Preceding gene: 116689553

Following gene: 116689537

Centisome position: 48.19

GC content: 73.12

Gene sequence:

>1689_bases
ATGGACATCAAGGTTATCCCTCATGGCGTGTTCCGGACGACTCTGATCGCGGCCACCGTTGCAGCCATGCTTTCCCTCTC
CGCGTGCGGCGGCTCCGGCTCCATCAGCCAGGGTCTCGGCGGCGGCGGTTCGAGCTCCGGCGGCGGCGATACGATCTCCA
CGTCGGGCGGCAACGGCTCGAGCGGCACCTCGGGTACGAGCGGTACCTCCGGCAGCAGCGGGACTTCGGGCACGAGCGGC
ACGTCCGGTACGTCCGGCACCAGCGGAACCTCTGGTACGAGCGGCACGTCGGGCACCAGCGGCACCTCGGGCTCGAGCGG
GACGTCCGGCACCTCGGGTGTGTCATCGAACGCAGTGGGAACTGTCCTCGCAAGCAGCAGCAACATCATCACGAACGCCG
GCAGCACCGTCTCCGGTCTCGGCTCCGTCATCGGCAGCCAGACGCTGCCGGGCGTCAATCCCGCCACCACGCAAGCCGCG
GGCGGCATCGTGCAAAGCGTCGGCGGCGCGGTCACCGCACTGGGCAACGGCCTCGGCAACGGGCTCGGCCAGCTCGGCGC
GACGAAGGACCCGGTCGGCACCACGGTCGCCAGCACCGGCGGCGTGGTCAATCAGCTCGGCGGCGCAGTCACGCAAACGG
GCAACCTGGTCACGAGCCTCGGCAGCGGCCCGCTGTCGCCGCTCGCGCCGGTCACCGGCGCCGTCGGCGGCCTCGTCACG
ACGCTCGGCGGCGCCGTGTCGAACGGCGGCACCACGCTCACCAATGTGCTGTCGACCGGCCCGATCCAGCAGGTCACGCA
AACGGTCAGCTCGGCCATCACGCCGATCACGACGATGGTCGGCCAGACGACCCAGACGATCGGCACGGCAACCGGCCTCG
GCGCACCGGTCAACACGCTGCTCGGCACGGTCGGCAACGGGCTGAACCAGGCCGGCGCCCTGCTCGCATCGACGGGCGGC
AACCCGGTCACCACGGGTCTCGGCAACACCGTCTCGTCGACGGGCAACACCGTGAAGGCCGTCGGCGGCCTGCTCACGGG
CGGCACCGGCGGCGTGACCAACCCGCTCGCCCCGCTCACGGGCCTCGTCTCCACGGTTACCGGCGCACTCGGTGGCGCGA
CGGGTGGCGGCAGCGGTCCTCTCGCACCGGTCACGGGCCTCGTCTCGACGGTCACCGGCGCACTCGGTGGCGTAGCAGGC
GGCGGCAGCGGCCCGCTCGCTCCGGTCACGGGCCTCGTCTCCACGGTCACCGGCGCGCTCGGCGGCGTAGCAGGCGGCGG
CAGCGGTCCGCTCGCACCGGTCACGGGCCTCGTCTCCACGGTCACCGGCGCACTCGGCGGCGCAGCAGGCGGCGGCAGCA
GCCCGCTCGCACCGGTTACGGGCCTCGTCTCCACGGTCACCGGCGCGCTCGGCGGCGCAACGGGTGGTACCAGCGGCGGC
CCGCTCGCCCCGGTCACGGGTCTCCTCGGCGCAGTCACGGGCGCCCTCGGCGGCGCAACGGGTGGCGCAGGCGGCAGCAG
CCCGCTCGCCCCGGTGACGAACGCCGTCTCCACGGTGACGAGCACGGTCGGCGTACCGGCACTGAGCGGCGGCACGGGTG
CCGTCACGAACTCGGGCGCGGCGTCGAATCCGCTTGCGCCCGTCACGTCGCTGATCGGCGGCCTGCTCGGCGGCACGCAC
GGCAAGTAA

Upstream 100 bases:

>100_bases
GCCGAACCGTCGGGCATCGAAATGGCACGACAGTTGCAGAGTAGTCCTCGCACCACTTAACACAACGCAGTTCACAACAC
ATTTTTAATGCGAGGAAGAA

Downstream 100 bases:

>100_bases
TCCGACATCCATTCATCGAAAAGACAGCGAGGAGTCCATCATGTCCCAGCAACGTTCCATCCCGACGGTCGCCCTGCGCC
AGTGGCGCGCGCCCCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Hemagglutinin-Related Transmembrane Protein; Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGGSSSGGGDTISTSGGNGSSGTSGTSGTSGSSGTSGTSG
TSGTSGTSGTSGTSGTSGTSGTSGSSGTSGTSGVSSNAVGTVLASSSNIITNAGSTVSGLGSVIGSQTLPGVNPATTQAA
GGIVQSVGGAVTALGNGLGNGLGQLGATKDPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVT
TLGGAVSNGGTTLTNVLSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGG
NPVTTGLGNTVSSTGNTVKAVGGLLTGGTGGVTNPLAPLTGLVSTVTGALGGATGGGSGPLAPVTGLVSTVTGALGGVAG
GGSGPLAPVTGLVSTVTGALGGVAGGGSGPLAPVTGLVSTVTGALGGAAGGGSSPLAPVTGLVSTVTGALGGATGGTSGG
PLAPVTGLLGAVTGALGGATGGAGGSSPLAPVTNAVSTVTSTVGVPALSGGTGAVTNSGAASNPLAPVTSLIGGLLGGTH
GK

Sequences:

>Translated_562_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGGSSSGGGDTISTSGGNGSSGTSGTSGTSGSSGTSGTSG
TSGTSGTSGTSGTSGTSGTSGTSGSSGTSGTSGVSSNAVGTVLASSSNIITNAGSTVSGLGSVIGSQTLPGVNPATTQAA
GGIVQSVGGAVTALGNGLGNGLGQLGATKDPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVT
TLGGAVSNGGTTLTNVLSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGG
NPVTTGLGNTVSSTGNTVKAVGGLLTGGTGGVTNPLAPLTGLVSTVTGALGGATGGGSGPLAPVTGLVSTVTGALGGVAG
GGSGPLAPVTGLVSTVTGALGGVAGGGSGPLAPVTGLVSTVTGALGGAAGGGSSPLAPVTGLVSTVTGALGGATGGTSGG
PLAPVTGLLGAVTGALGGATGGAGGSSPLAPVTNAVSTVTSTVGVPALSGGTGAVTNSGAASNPLAPVTSLIGGLLGGTH
GK
>Mature_562_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGGSSSGGGDTISTSGGNGSSGTSGTSGTSGSSGTSGTSG
TSGTSGTSGTSGTSGTSGTSGTSGSSGTSGTSGVSSNAVGTVLASSSNIITNAGSTVSGLGSVIGSQTLPGVNPATTQAA
GGIVQSVGGAVTALGNGLGNGLGQLGATKDPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVT
TLGGAVSNGGTTLTNVLSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGG
NPVTTGLGNTVSSTGNTVKAVGGLLTGGTGGVTNPLAPLTGLVSTVTGALGGATGGGSGPLAPVTGLVSTVTGALGGVAG
GGSGPLAPVTGLVSTVTGALGGVAGGGSGPLAPVTGLVSTVTGALGGAAGGGSSPLAPVTGLVSTVTGALGGATGGTSGG
PLAPVTGLLGAVTGALGGATGGAGGSSPLAPVTNAVSTVTSTVGVPALSGGTGAVTNSGAASNPLAPVTSLIGGLLGGTH
GK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49613; Mature: 49613

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGGSSSGGGDTISTSGGNGS
CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCC
SGTSGTSGTSGSSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGSSGTSGTSGVSSNAVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TVLASSSNIITNAGSTVSGLGSVIGSQTLPGVNPATTQAAGGIVQSVGGAVTALGNGLGN
EEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGQLGATKDPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVT
HHHHCCCCCCCCCCHHHHCCCHHHHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHH
TLGGAVSNGGTTLTNVLSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTL
HHCCHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
LGTVGNGLNQAGALLASTGGNPVTTGLGNTVSSTGNTVKAVGGLLTGGTGGVTNPLAPLT
HHHHCCCHHHHHHEEECCCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH
GLVSTVTGALGGATGGGSGPLAPVTGLVSTVTGALGGVAGGGSGPLAPVTGLVSTVTGAL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GGVAGGGSGPLAPVTGLVSTVTGALGGAAGGGSSPLAPVTGLVSTVTGALGGATGGTSGG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PLAPVTGLLGAVTGALGGATGGAGGSSPLAPVTNAVSTVTSTVGVPALSGGTGAVTNSGA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASNPLAPVTSLIGGLLGGTHGK
CCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGGSSSGGGDTISTSGGNGS
CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCC
SGTSGTSGTSGSSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGSSGTSGTSGVSSNAVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TVLASSSNIITNAGSTVSGLGSVIGSQTLPGVNPATTQAAGGIVQSVGGAVTALGNGLGN
EEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGQLGATKDPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVT
HHHHCCCCCCCCCCHHHHCCCHHHHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHH
TLGGAVSNGGTTLTNVLSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTL
HHCCHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
LGTVGNGLNQAGALLASTGGNPVTTGLGNTVSSTGNTVKAVGGLLTGGTGGVTNPLAPLT
HHHHCCCHHHHHHEEECCCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH
GLVSTVTGALGGATGGGSGPLAPVTGLVSTVTGALGGVAGGGSGPLAPVTGLVSTVTGAL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GGVAGGGSGPLAPVTGLVSTVTGALGGAAGGGSSPLAPVTGLVSTVTGALGGATGGTSGG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PLAPVTGLLGAVTGALGGATGGAGGSSPLAPVTNAVSTVTSTVGVPALSGGTGAVTNSGA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASNPLAPVTSLIGGLLGGTHGK
CCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA