Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is marR [C]
Identifier: 116689528
GI number: 116689528
Start: 1662769
End: 1663260
Strand: Reverse
Name: marR [C]
Synonym: Bcen2424_1506
Alternate gene names: 116689528
Gene position: 1663260-1662769 (Counterclockwise)
Preceding gene: 116689535
Following gene: 116689527
Centisome position: 47.74
GC content: 64.02
Gene sequence:
>492_bases ATGTCGGATTCTCCTACCCCACCGCCCGTTTCGCCGCTGTCTACGTATCAGATGAACGACAGCGTCGGTTATCTGATGTC GCGCGTGAAGTCGGTGATGACCAATCTCGTCACGCAGCGCACGCAGGAAGAGCTCGGCATCACGGGCACGCAGGCGAGCA TGCTGTTCATGATCGCGGTCGGCAAGTGCTCGACGGCCGCCGAACTCGCACGCGAATACGGCATCGACGCAAGCGCGGTC ACGCGCCTGCTCGACCGGGTCGAGAAACGCGGCCTGCTGTCACGCGTGCGGAGCGTCGAGGATCGGCGCGTCGTGCGGCT CGAGCTCACCGACGAAGGCCGCGCGCTGGCCGAACGGCTGCCGCCCATTTTCCGCAGCGTGCTCGACCAGGTGCTGGACG GGTTTACGCCGGAAGAAGTCGGGTTCCTGAAGAGCATGCTGCGCCGCATTCTCAGCAACTATTGCGAGACGACCGGCGGT AGCATCACGTAA
Upstream 100 bases:
>100_bases GCCGGACGGAGCGCGCGTTTCGCGGTTCGATTAACATTTGCCGCGGCAAGCAATTGTGCCTATACTGCTGCCTAGTCAAC TATTGCAGCTTCAGGGTTTT
Downstream 100 bases:
>100_bases TAGTTGCCATAACAATTACTTTTGACAGATTAATGTAAGGAAATCCTTGCAGTGTCCATCATTCATTCCGAGTCAGGGGT TAGCGCGATGAAAACCTCCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Multiple Antibiotic Resistance Protein; Transcriptional Regulators; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDSPTPPPVSPLSTYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAV TRLLDRVEKRGLLSRVRSVEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETTGG SIT
Sequences:
>Translated_163_residues MSDSPTPPPVSPLSTYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAV TRLLDRVEKRGLLSRVRSVEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETTGG SIT >Mature_162_residues SDSPTPPPVSPLSTYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAVT RLLDRVEKRGLLSRVRSVEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETTGGS IT
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18018; Mature: 17887
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSPTPPPVSPLSTYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAV CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSVEDRRVVRLELTDEGRALAERL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHC PPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETTGGSIT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDSPTPPPVSPLSTYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAV CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSVEDRRVVRLELTDEGRALAERL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHC PPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETTGGSIT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA