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The map label for this gene is scpB [H]

Identifier: 116689518

GI number: 116689518

Start: 1648527

End: 1649564

Strand: Direct

Name: scpB [H]

Synonym: Bcen2424_1496

Alternate gene names: 116689518

Gene position: 1648527-1649564 (Clockwise)

Preceding gene: 116689517

Following gene: 116689519

Centisome position: 47.32

GC content: 67.15

Gene sequence:

>1038_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCTTTGATCTGCGCGCAGGAACCGCTGAAGCTCGGCGATTTGCG
CAAGCTCTTTGCCGACGGCGTGTCGGCTGACACGGTCCGCACGTTACTCGAAGATCTGAAACAGGATTGGTCCGGCCGCG
GTGTCGAACTGGTGGCGCTGGCGACCGGGTGGCGCTTTCAGAGCAAGCCGGCGATGCGTCATTATCTGGATCGCCTGCAT
CCCGAGAAGCCGCCGAAATATTCGCGCGCCGTGCTCGAAACGCTCGCGATCATCGCGTACCGGCAGCCCGTCACGCGCGG
CGACATCGAAGAGATTCGCGGCGTCACGGTCAATACGCAGGTGGTCAAGCAGCTCGAGGATCGCGGCTGGATCGAGGTGA
TCGGTCATCGCGACGTGCCGGGGCGTCCGGCGCTGTATGCGACGACCAAGCAGTTCCTCGACGATCTCGGCCTGAAGGCG
CTCGACGACCTGCCGGCGCTCGAAGAGCCGGCCGCGAACATCGAGGCCGCGCTGCTCGCGCAGCAGGCCATGGATTTCGA
CGGTGACGTCGTGGTGGCCGACGACGCGGCGGCCGACGTGCCGCAGGCGCTAGCGGATGAAGCGCCCGCCGACGAGTCGG
CTGAAGGGCCCGGCGATGCCGCGGCCGACGTCGCGTCGACGCAGGAAATTCCGAGTCGCGATACGCTCGATGCTGATCGC
GGGCAAACGGAACAGATGGAACAGGTTGGCGCCGAAGCAGTGCCGACCGGTGTGCAGCCCGAGCCGCAGCGTGCGGATTG
GAGTGAGGAAGATCGCAAGCCGGCTGCCGAAGCGGCTGCCGGAGACGGAGCGGAAGCGGCCGGCGACATGCCCGGCGAGG
CCGATCAGGCCGACGCCTCCCGCTCCCGTCCCGCGGACGACGAGACGCTGGACGACACGTCCGACAGTCTCGCGGATGCC
GTCCGAAGCGCCAGTGCGCCCATCGGCGCCGACGCGCTGCCGGACGACGAAGCAGAACCCGAACAGCGTCGCGCCTGA

Upstream 100 bases:

>100_bases
CCCATCAATATGACCGATCAGAATCGGGCGAGCGCGTCTTCCGTTCCTTTCGTCTGTTTGTTGATCCGGTTCGTTTGACC
ACAGGGTCTGGCCTAGCTGC

Downstream 100 bases:

>100_bases
TCGCGGCCAACTTCTTGCCGCGCCCGCGCCGGGCGCGAGACCTGACATTTTGAGGTTGTTTTGACAGATATCCACGATAT
TGAATCGTCCGCGCCTGCCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDGDVVVADDAAADVPQALADEAPADESAEGPGDAAADVASTQEIPSRDTLDADR
GQTEQMEQVGAEAVPTGVQPEPQRADWSEEDRKPAAEAAAGDGAEAAGDMPGEADQADASRSRPADDETLDDTSDSLADA
VRSASAPIGADALPDDEAEPEQRRA

Sequences:

>Translated_345_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDGDVVVADDAAADVPQALADEAPADESAEGPGDAAADVASTQEIPSRDTLDADR
GQTEQMEQVGAEAVPTGVQPEPQRADWSEEDRKPAAEAAAGDGAEAAGDMPGEADQADASRSRPADDETLDDTSDSLADA
VRSASAPIGADALPDDEAEPEQRRA
>Mature_345_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVALATGWRFQSKPAMRHYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAANIEAALLAQQAMDFDGDVVVADDAAADVPQALADEAPADESAEGPGDAAADVASTQEIPSRDTLDADR
GQTEQMEQVGAEAVPTGVQPEPQRADWSEEDRKPAAEAAAGDGAEAAGDMPGEADQADASRSRPADDETLDDTSDSLADA
VRSASAPIGADALPDDEAEPEQRRA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 36889; Mature: 36889

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRHYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAANIEAALLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH
QQAMDFDGDVVVADDAAADVPQALADEAPADESAEGPGDAAADVASTQEIPSRDTLDADR
HHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
GQTEQMEQVGAEAVPTGVQPEPQRADWSEEDRKPAAEAAAGDGAEAAGDMPGEADQADAS
CCHHHHHHHCHHHCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCHHCCCCCCCCCCCHHH
RSRPADDETLDDTSDSLADAVRSASAPIGADALPDDEAEPEQRRA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQDWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRHYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAANIEAALLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHH
QQAMDFDGDVVVADDAAADVPQALADEAPADESAEGPGDAAADVASTQEIPSRDTLDADR
HHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
GQTEQMEQVGAEAVPTGVQPEPQRADWSEEDRKPAAEAAAGDGAEAAGDMPGEADQADAS
CCHHHHHHHCHHHCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCHHCCCCCCCCCCCHHH
RSRPADDETLDDTSDSLADAVRSASAPIGADALPDDEAEPEQRRA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]