Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689505
Identifier: 116689505
GI number: 116689505
Start: 1636766
End: 1638976
Strand: Reverse
Name: 116689505
Synonym: Bcen2424_1483
Alternate gene names: NA
Gene position: 1638976-1636766 (Counterclockwise)
Preceding gene: 116689506
Following gene: 116689491
Centisome position: 47.04
GC content: 66.53
Gene sequence:
>2211_bases ATGCGGAATACGGTCCGGCGCGGCCATCGCTCGCCTTTGGCAATTTTCGACTGGTTTTCCGGCCTGCGACGCACGGTCGC CCCAAGATCGCATAGGACATCCCGCGTGTTCGGCTGCGGCGCGCTGGCGCTCGCCCTGCTCTGTGCGGGCTGCGCCGAAT CGGCCGCGCAGCGCGACAGCAACACGTCCATCGCATCGACGAAGATCGAGCGCACCAAGGCCGAGCGGCTCGCGCGCGAG CAGCAGATCGCGCGCACCGTGCCGTCGCTCGCATCGATCAGCCTCACGCAGCCGCGCCCGTTCACGCTGCGCGACTCGGG CCAGAACGGCGCGATGACGTTCCTGCGCGACGTCGATTTCCGCATCGTCAACAACCTCGGCTTCTTCATCCATCAGCTGT CGGCCACGCTCGTGCCGACGCAGGCCGGCGCACCGATCGTCTTCGACGATCCGACGAGCTTCGAGATCGACGTGCACGAA GGCACGGTCACGCTCGACAACGCGAAGCTGACCGCCCTCTTCAACACCTACATCTTCGGCTATCGCAACGCGCCGCTGCG CAAGCTCGCGGTATCGGCCGGCGACGGCGTGATCCATCTGCAAGGCGAGATGCAGCGCGACGGCTGGGTACCGTTCTCGC TGACCGGCACGCTCGCGATCCGCGACGGCAGCCAGCTCGTGTTCCACCCGACCGGCGTGCGCGTGTCGGGCCTCAACGCA CAGCCGGTGATGCGCGCGGCCAACGTGAAAATGGCCGACCTGCTGAAGGTGCAGACCCCGATCGCGCAACTCGCCGGCGA CGATCTTGTGATGGCGGTCGACAAGCTGATGCCGCCGCCGCGCCTGAAACTCACGATCACCGCCGTGCGCGTGACGCCGG CGGGCCTCGACCTGAAGCTCGACGACGGCTCGCGTGCCGGCTTCGCGATGCCCGCGAACGCACCGCAGCAAGCGATGTAC ATCCGCGGTGGCGACGTGAAGTTCATGCGCTCGATGCCGATGAACGCGGACATCCTGATCGGTCCGCTCGACGCGTCGAA GCGCGACCAGACGTTCGTGTTCGACCTGTATCACTATCGCGACCAGGTATCGGCCGGCTACTTCAACTTCGACGAAAGCG GCGCGATGGCGATCCGGATGCCTTCGTATGCAGGCCCGGCCAGCGGCGCGCTGCTCGGCAGCGCGGCCGCGCGCCTGAAC GACAGCTTCCTCGCCGCGCAGCAGAATGCGCTGCGCGACGTGCGCCAGCACTGGGAAGCGTACGCGCTCGCCGCAGACGC CGTGCGGCCCGGCATGCAGAAGGTCGCGATGCGGCGTACGTCGACGACGCCGTTCAACGAGCGGCACGTGTCGAACCGCA ACCCGACGATCCATCTGCGCAACGTCGACTTCAACCTGTCCGGCGATATCGGCTTTCATGTCGAAGATCTCGACGTGGAA CTCGTGTCGAAGCACCCGGGCGAACCCGTCGATCTCGACGATCCGAACCAGTACGACATCCGCATTCTCGGCGGCACGGT CGTCGAGTCGTGGAAGGCGATGTCGGCGCTCTTCAACAACTACCTGCTCGACTATTCGCCGCGTTCGCTGAACGACCTGC AATTGAGTGCTGACGGCCAGAACCTGCGCGTCCAGGGCGGCATCAAGCTGTGGAATCACGTACCAGGCGTCTGGTTGCCG ACCGACATGAAGGGCTCGCTGACGGTGCTCGATGATCGGCACCTCGCCTTCAAGCCGTCTCAGGTGTCGGTGCTCGGCAT CCCGCAGGCGACGCTGCTGCGCTCGCTCGGTATCGAGCTCGCGTCGCTGACGCCATTGCAGCGGCGCGGCGCGGAACTGC GCGGCGACACACTCGTGCTCGACCAGTACACCGTGTTCCCGCCGCCCGTGCTGAACGGCAAGCTCGCCCAGGCGACGGTC GAGCCCGACGGATTGCGGCTCACGTTCCGGCGCGCGGCAGGCGCGCCCGCACCGAAGCGGCCGCAGATCGATGCACCGAG CTACATGTGGATGGAAGGCGGCGACATGAAGATGTTCAACGTGCTCGAACTGAACGTGCGCGCGCTGATCCGGAATTCGG CCGAGGCCGGCCCGATGCGGTTCGACCTGTACGGCTATCGCAGCCAGGTCGCGCAGGGCTCGGTGCGAATGCTGCCGGAC GGCACGCTGGTCGTCGACATGGGGCGCAAGAATCCGCTCGCGTCACGCTGA
Upstream 100 bases:
>100_bases ACGCCGCTCTAGCGCGCTATGACACACTGCACGGCATCGACGCTCGCGCTGTGCAGTGGCGCGCGCCGCCGTCGATCAAG ACAAGACATGGAGACAGACG
Downstream 100 bases:
>100_bases TTCCGTCGCGCTGACCTCGTGCGCGACCCGCATGAAAAAAGCCCGGTGGCAGGTCGCCAACCGGGCTTTCCGATGCATGC TGCGCGCCGTGCACTCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 736; Mature: 736
Protein sequence:
>736_residues MRNTVRRGHRSPLAIFDWFSGLRRTVAPRSHRTSRVFGCGALALALLCAGCAESAAQRDSNTSIASTKIERTKAERLARE QQIARTVPSLASISLTQPRPFTLRDSGQNGAMTFLRDVDFRIVNNLGFFIHQLSATLVPTQAGAPIVFDDPTSFEIDVHE GTVTLDNAKLTALFNTYIFGYRNAPLRKLAVSAGDGVIHLQGEMQRDGWVPFSLTGTLAIRDGSQLVFHPTGVRVSGLNA QPVMRAANVKMADLLKVQTPIAQLAGDDLVMAVDKLMPPPRLKLTITAVRVTPAGLDLKLDDGSRAGFAMPANAPQQAMY IRGGDVKFMRSMPMNADILIGPLDASKRDQTFVFDLYHYRDQVSAGYFNFDESGAMAIRMPSYAGPASGALLGSAAARLN DSFLAAQQNALRDVRQHWEAYALAADAVRPGMQKVAMRRTSTTPFNERHVSNRNPTIHLRNVDFNLSGDIGFHVEDLDVE LVSKHPGEPVDLDDPNQYDIRILGGTVVESWKAMSALFNNYLLDYSPRSLNDLQLSADGQNLRVQGGIKLWNHVPGVWLP TDMKGSLTVLDDRHLAFKPSQVSVLGIPQATLLRSLGIELASLTPLQRRGAELRGDTLVLDQYTVFPPPVLNGKLAQATV EPDGLRLTFRRAAGAPAPKRPQIDAPSYMWMEGGDMKMFNVLELNVRALIRNSAEAGPMRFDLYGYRSQVAQGSVRMLPD GTLVVDMGRKNPLASR
Sequences:
>Translated_736_residues MRNTVRRGHRSPLAIFDWFSGLRRTVAPRSHRTSRVFGCGALALALLCAGCAESAAQRDSNTSIASTKIERTKAERLARE QQIARTVPSLASISLTQPRPFTLRDSGQNGAMTFLRDVDFRIVNNLGFFIHQLSATLVPTQAGAPIVFDDPTSFEIDVHE GTVTLDNAKLTALFNTYIFGYRNAPLRKLAVSAGDGVIHLQGEMQRDGWVPFSLTGTLAIRDGSQLVFHPTGVRVSGLNA QPVMRAANVKMADLLKVQTPIAQLAGDDLVMAVDKLMPPPRLKLTITAVRVTPAGLDLKLDDGSRAGFAMPANAPQQAMY IRGGDVKFMRSMPMNADILIGPLDASKRDQTFVFDLYHYRDQVSAGYFNFDESGAMAIRMPSYAGPASGALLGSAAARLN DSFLAAQQNALRDVRQHWEAYALAADAVRPGMQKVAMRRTSTTPFNERHVSNRNPTIHLRNVDFNLSGDIGFHVEDLDVE LVSKHPGEPVDLDDPNQYDIRILGGTVVESWKAMSALFNNYLLDYSPRSLNDLQLSADGQNLRVQGGIKLWNHVPGVWLP TDMKGSLTVLDDRHLAFKPSQVSVLGIPQATLLRSLGIELASLTPLQRRGAELRGDTLVLDQYTVFPPPVLNGKLAQATV EPDGLRLTFRRAAGAPAPKRPQIDAPSYMWMEGGDMKMFNVLELNVRALIRNSAEAGPMRFDLYGYRSQVAQGSVRMLPD GTLVVDMGRKNPLASR >Mature_736_residues MRNTVRRGHRSPLAIFDWFSGLRRTVAPRSHRTSRVFGCGALALALLCAGCAESAAQRDSNTSIASTKIERTKAERLARE QQIARTVPSLASISLTQPRPFTLRDSGQNGAMTFLRDVDFRIVNNLGFFIHQLSATLVPTQAGAPIVFDDPTSFEIDVHE GTVTLDNAKLTALFNTYIFGYRNAPLRKLAVSAGDGVIHLQGEMQRDGWVPFSLTGTLAIRDGSQLVFHPTGVRVSGLNA QPVMRAANVKMADLLKVQTPIAQLAGDDLVMAVDKLMPPPRLKLTITAVRVTPAGLDLKLDDGSRAGFAMPANAPQQAMY IRGGDVKFMRSMPMNADILIGPLDASKRDQTFVFDLYHYRDQVSAGYFNFDESGAMAIRMPSYAGPASGALLGSAAARLN DSFLAAQQNALRDVRQHWEAYALAADAVRPGMQKVAMRRTSTTPFNERHVSNRNPTIHLRNVDFNLSGDIGFHVEDLDVE LVSKHPGEPVDLDDPNQYDIRILGGTVVESWKAMSALFNNYLLDYSPRSLNDLQLSADGQNLRVQGGIKLWNHVPGVWLP TDMKGSLTVLDDRHLAFKPSQVSVLGIPQATLLRSLGIELASLTPLQRRGAELRGDTLVLDQYTVFPPPVLNGKLAQATV EPDGLRLTFRRAAGAPAPKRPQIDAPSYMWMEGGDMKMFNVLELNVRALIRNSAEAGPMRFDLYGYRSQVAQGSVRMLPD GTLVVDMGRKNPLASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80647; Mature: 80647
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTVRRGHRSPLAIFDWFSGLRRTVAPRSHRTSRVFGCGALALALLCAGCAESAAQRDS CCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC NTSIASTKIERTKAERLAREQQIARTVPSLASISLTQPRPFTLRDSGQNGAMTFLRDVDF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEEECCCCCCEEEEHHCCH RIVNNLGFFIHQLSATLVPTQAGAPIVFDDPTSFEIDVHEGTVTLDNAKLTALFNTYIFG HHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCEEEEEECCEEEECCCEEEEEEEEEEEE YRNAPLRKLAVSAGDGVIHLQGEMQRDGWVPFSLTGTLAIRDGSQLVFHPTGVRVSGLNA ECCCCHHEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECCCC QPVMRAANVKMADLLKVQTPIAQLAGDDLVMAVDKLMPPPRLKLTITAVRVTPAGLDLKL CCHHHHCCCCHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEE DDGSRAGFAMPANAPQQAMYIRGGDVKFMRSMPMNADILIGPLDASKRDQTFVFDLYHYR CCCCCCCEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCEEEEEEHHHH DQVSAGYFNFDESGAMAIRMPSYAGPASGALLGSAAARLNDSFLAAQQNALRDVRQHWEA HHCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YALAADAVRPGMQKVAMRRTSTTPFNERHVSNRNPTIHLRNVDFNLSGDIGFHVEDLDVE HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCEE LVSKHPGEPVDLDDPNQYDIRILGGTVVESWKAMSALFNNYLLDYSPRSLNDLQLSADGQ EECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCEEEECCCC NLRVQGGIKLWNHVPGVWLPTDMKGSLTVLDDRHLAFKPSQVSVLGIPQATLLRSLGIEL EEEEECCEEHHHCCCCEEECCCCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHCCHH ASLTPLQRRGAELRGDTLVLDQYTVFPPPVLNGKLAQATVEPDGLRLTFRRAAGAPAPKR HHCCCHHHCCCCCCCCEEEEECEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC PQIDAPSYMWMEGGDMKMFNVLELNVRALIRNSAEAGPMRFDLYGYRSQVAQGSVRMLPD CCCCCCCEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCEEECCC GTLVVDMGRKNPLASR CEEEEECCCCCCCCCC >Mature Secondary Structure MRNTVRRGHRSPLAIFDWFSGLRRTVAPRSHRTSRVFGCGALALALLCAGCAESAAQRDS CCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC NTSIASTKIERTKAERLAREQQIARTVPSLASISLTQPRPFTLRDSGQNGAMTFLRDVDF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEEECCCCCCEEEEHHCCH RIVNNLGFFIHQLSATLVPTQAGAPIVFDDPTSFEIDVHEGTVTLDNAKLTALFNTYIFG HHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCEEEEEECCEEEECCCEEEEEEEEEEEE YRNAPLRKLAVSAGDGVIHLQGEMQRDGWVPFSLTGTLAIRDGSQLVFHPTGVRVSGLNA ECCCCHHEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECCCC QPVMRAANVKMADLLKVQTPIAQLAGDDLVMAVDKLMPPPRLKLTITAVRVTPAGLDLKL CCHHHHCCCCHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEE DDGSRAGFAMPANAPQQAMYIRGGDVKFMRSMPMNADILIGPLDASKRDQTFVFDLYHYR CCCCCCCEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCEEEEEEHHHH DQVSAGYFNFDESGAMAIRMPSYAGPASGALLGSAAARLNDSFLAAQQNALRDVRQHWEA HHCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YALAADAVRPGMQKVAMRRTSTTPFNERHVSNRNPTIHLRNVDFNLSGDIGFHVEDLDVE HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCEE LVSKHPGEPVDLDDPNQYDIRILGGTVVESWKAMSALFNNYLLDYSPRSLNDLQLSADGQ EECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCEEEECCCC NLRVQGGIKLWNHVPGVWLPTDMKGSLTVLDDRHLAFKPSQVSVLGIPQATLLRSLGIEL EEEEECCEEHHHCCCCEEECCCCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHCCHH ASLTPLQRRGAELRGDTLVLDQYTVFPPPVLNGKLAQATVEPDGLRLTFRRAAGAPAPKR HHCCCHHHCCCCCCCCEEEEECEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC PQIDAPSYMWMEGGDMKMFNVLELNVRALIRNSAEAGPMRFDLYGYRSQVAQGSVRMLPD CCCCCCCEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCEEEEEECHHHHHCCCCEEECCC GTLVVDMGRKNPLASR CEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA