Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is pheT [H]

Identifier: 116689502

GI number: 116689502

Start: 1633312

End: 1635741

Strand: Direct

Name: pheT [H]

Synonym: Bcen2424_1480

Alternate gene names: 116689502

Gene position: 1633312-1635741 (Clockwise)

Preceding gene: 162227932

Following gene: 116689503

Centisome position: 46.88

GC content: 65.8

Gene sequence:

>2430_bases
ATGCAATTCCCTGAATCCTGGTTGAGAACCTTTGTCGACCCGCAGCTGACGACCGACGAGCTGTCGCACGCGCTGACGAT
GGCGGGGCTCGAAGTCGAATCGCTGAGCAAGGCTGCGCCGCCGACGTCGAAGATCGTCGTGGGCCGCGTGCTCGAAGTCG
TCAAGCATCCGGATGCGGACAAGCTCAATGTCTGCCAGGTCGACGCCGGCACCGGCGCGACGCTGAACATCGTCTGCGGC
GCGCCGAACGTGGCGCCCGGCATCAAGGTGCCGGTCGCGCTGGTGGGCGCGGAACTGCCGCCGGCGGAAGAGGGCGGCAA
GCCGTTCGCGATCAAGCTGTCGAAGCTGCGCGGCGTGGAGAGCCAGGGGATGCTGTGCTCGGCGCGCGAGCTGAAGTTGT
CCGAGGATCACAGCGGGCTGCTGATCCTGCCGGAAGACACGCCGGTCGGCCAGGACATCCGCGAGACCCTCAATCTCGAT
GACACGATCTTCGAAATCAAGCTGACGCCGAACAAGGCCGACTGTCTGTCGGTGTTCGGCATCGCGCGCGAGACGGCCGC
GATCACCGGCGCACCGCTGACGCCGGTCGACATCCGTCCGGTGAACGTCGAGCTCGACGAAACGCTGCCGGTGCGCATTG
CCGCGCCCGATCTGTGCGGCCGTTTCTCGGGTCGCGTGATCCGCGGCGTGAACGCGCATGCGAAGACGCCGCAGTGGATG
GTCGAGCGCCTCGAGCGCTCGGGCCAGCGCAGCGTGTCCGCGCTCGTCGACATCTCGAACTACGTGATGTTCGAACTCGG
CCGCCCGTCGCACGTGTTCGATCTCGACAAGATCCACGGCGGCATCGAAGTGCGCTGGGGCAAGCGCGGCGAATCGCTGA
AGCTGCTCAACGGCAACACGGTCGAACTCGACGAAACGGTCGGCGTGATCGCGGACGACCGTCAGGTCGAAAGCCTGGCC
GGCATCATGGGCGGCGACAGCACGGCCGTCACGCTCGATACGACCAACATCTACCTGGAAGCCGCGTTCTGGTGGCCGGA
CAGCATCCGCGGCCGCGCGCGCAAGTACAACTTCTCGACCGATGCGGCCCATCGCTTCGAGCGCGGCGTCGATTACGCGA
CGACCGTCGAGCACGTCGAGCGCATTACGCAGCTGATCCTCGAGATCTGCGGCGGCAAGGCCGGCCCGGTCGACGATCAG
GCGGTGAACCTGCCGCAGCGCGCGCCGGTGAAGATGCGCGTGTCGCGCGCGAACCGCATCATCGGCGTGAAGATCGACGC
CGACGAGATCGCGGACATCTTCACGCGCCTCGGCCTGCCGTTCGAGCGTGAAGACGACGCGTTCCTCGTCACGCCGCCGT
CGCATCGCTTCGACATCGAGATCGAGGAAGACCTGATCGAGGAAGTGGCGCGCATCTACGGTTTCGAGAAGATCCCGGCG
CGGCCGCCGGTCGCGACGAGCGAAATGCGCGCGACCCACGAGACGCGACGTTCGATCCACGATATCCGTCACGCGCTCGC
CGCGCGCGACTACGCGGAAACCGTCAACTTCAGCTTCGTCGATGCGGAGTGGGAGCACGATTTCGCGGGCAACGACAACC
CGATCCGCCTGCTGAACCCGATCGCGAGCCAGCTTTCGGTGATGCGCACGACGCTGTTCGGCAGCCTGATCGCCGTACTG
CGCCACAACCTGAACCGCCGCGCCGATCGCGTGCGCGTGTTCGAATCGGGGCGCGTGTTCGTCGCCGATCCGTCGGTGAA
GGCCGGCGAGCTGGCGGTCGAAGGTCATGCGCAGCCGAAGCGCGTCGGCGCGCTGGCGTACGGTCCGGCACTCGACGAGC
AGTGGGGCGTGGCGACCCGCGCGGTCGATTTCTTCGACGTGAAGGGTGATCTCGAAGCGCTGCTCGCGCCGGCGGTTGCA
CGTTTCGTGAAGGCCGAGCATCCGGCCCTTCATCCGGGGCGCAGCGCACGGATCGAAATCGATGGCCGTGCGGTCGGCTG
GATCGGCGAGTTGCATCCGCGCCTGATGCAGAAATACGAGCTGCCGCACCCGCCGGTGATGTTCGAAATCGACGCGGACG
CGCTGATTGCCCGGACGCTGCCCGCGCCGACCGACGTGTCGAAATTCCCGCCGGTCCGTCGCGATATCGCCGTTGTCGTC
GATCAGGCGGTCGAGGTTCAGGCACTTTTCGACGAAATGAAGAAGGCGCTTGCCGAAGAGGCCTGCCGATTCGTTCAGAA
GGTTGTACTCTTCGACGAATTTCGTGCAAAATCAAATACTTCCGGTGGTCTTGCCGCGAACGAGAAGAGCCTTGCCTTCC
GCGTGACGCTGCAGGACGCGGCTGGCACGCTGCAGGACGAGGTCGTCGATCAGGCGATTCAGACGCTGGTCGAGCGAATG
GCTCGTGCCGGTGCGCGCCTGCGCGGCTAA

Upstream 100 bases:

>100_bases
AACGCCGCTCGCCGCGCCGACCTGTGCCCGCGCACGCCCCCGATGGACGTTTCCGACGGGGCCCGGGCGTCGATCTAACC
TGTTTCGAACGTAGACATCC

Downstream 100 bases:

>100_bases
GGAGAGGGCCCGCCCGTTCGCGGGCGGCTTTTTTCCATCGTAAGTTTTGATTCAACGCGCTGTATGGCAGATATGAACGA
CATGACCTCGAGTGAATTCG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 809; Mature: 809

Protein sequence:

>809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVNVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVIADDRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
AVNLPQRAPVKMRVSRANRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATHETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIRLLNPIASQLSVMRTTLFGSLIAVL
RHNLNRRADRVRVFESGRVFVADPSVKAGELAVEGHAQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIEIDGRAVGWIGELHPRLMQKYELPHPPVMFEIDADALIARTLPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG

Sequences:

>Translated_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVNVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVIADDRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
AVNLPQRAPVKMRVSRANRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATHETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIRLLNPIASQLSVMRTTLFGSLIAVL
RHNLNRRADRVRVFESGRVFVADPSVKAGELAVEGHAQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIEIDGRAVGWIGELHPRLMQKYELPHPPVMFEIDADALIARTLPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG
>Mature_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVNVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVIADDRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
AVNLPQRAPVKMRVSRANRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATHETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIRLLNPIASQLSVMRTTLFGSLIAVL
RHNLNRRADRVRVFESGRVFVADPSVKAGELAVEGHAQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIEIDGRAVGWIGELHPRLMQKYELPHPPVMFEIDADALIARTLPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=400, Percent_Identity=24.25, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI1788006, Length=815, Percent_Identity=42.4539877300613, Blast_Score=624, Evalue=1e-179,
Organism=Drosophila melanogaster, GI21355211, Length=396, Percent_Identity=26.2626262626263, Blast_Score=95, Evalue=2e-19,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 88715; Mature: 88715

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEHHHCCCC
SQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
CCCCEEEHHHCEECCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IARETAAITGAPLTPVDIRPVNVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
HHHHHHEECCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHCCCCEEECCCCCCCCHHHH
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
HHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE
VELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
EEECCCCCEEECCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEEECCCC
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQAVNLPQRAPVKMRVSRANRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCEE
IGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
EEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATHETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIRLLNP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEHHHH
IASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFESGRVFVADPSVKAGELAVEGHAQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCEEEECCCCCH
RVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVARFVKAEHPALHPGRSARIEI
HCCEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQKYELPHPPVMFEIDADALIARTLPAPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAANEKSLAFRVTLQDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCC
AGTLQDEVVDQAIQTLVERMARAGARLRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEHHHCCCC
SQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
CCCCEEEHHHCEECCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IARETAAITGAPLTPVDIRPVNVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
HHHHHHEECCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHCCCCEEECCCCCCCCHHHH
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
HHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE
VELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
EEECCCCCEEECCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEEECCCC
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQAVNLPQRAPVKMRVSRANRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCEE
IGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
EEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATHETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIRLLNP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEHHHH
IASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFESGRVFVADPSVKAGELAVEGHAQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCEEEECCCCCH
RVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVARFVKAEHPALHPGRSARIEI
HCCEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQKYELPHPPVMFEIDADALIARTLPAPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAANEKSLAFRVTLQDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCC
AGTLQDEVVDQAIQTLVERMARAGARLRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA