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The map label for this gene is uhpA [C]

Identifier: 116689486

GI number: 116689486

Start: 1619058

End: 1619744

Strand: Reverse

Name: uhpA [C]

Synonym: Bcen2424_1464

Alternate gene names: 116689486

Gene position: 1619744-1619058 (Counterclockwise)

Preceding gene: 116689489

Following gene: 116689483

Centisome position: 46.49

GC content: 65.65

Gene sequence:

>687_bases
ATGCGCGGCAATGCCTGCGTCGAAGCACGCTGTTTTTATGTCGCGACACACCGCCGCGAGATGCCTGAAAGGGTACGATG
CGGCGCGGATGCGGCACAATACGCAAAAATACATAAGCATTTCCCTCCGCCTGCCTGCGCCATGCCCGATCTCGATTACC
AGACCGCCTTCCACCTCGCGCCGCTCGGCCTCGTGCTGTCGCGCGACCGCGTGATCGAGGACTGCAACGACGCGCTCGCG
TCGATCTTCCGCTGCGCGCGGGCCGACCTGATCGGGAAATCGTACGCTGTGCTCTACCCGTCGACGGACGAATTCCAGCG
AATCGGCGAGCGCATCGCACGCGTGATGGTCGCGAACGGCGTCTACTCGGATGACAGAATCATGAAACGCGCGGACGGAG
AGCTGTTCTGGTGCCACGTGACGGGCCGCGCGCTCGACCGCACCGCGCCGCTCGCGGCGGGCGTCTGGACCTTCGAGGAT
TTGAGTGCGACGCGCCGCGTCGCGGTCGAGCTGACTCCGCGCGAGCGCGAGATCGCTGCCCAGCTCGCGACCGGCAAGAC
CAGCAAGCAGATCGGGCGCGTGCTCGACATCAGCTCGCGCACGGTCGACATCTACCGCGCCCGGCTGATGCGCAAATACG
GGACGAACAATACGCCGGAGCTGCTGCAGCGCCTGCTCGGGCAGTGA

Upstream 100 bases:

>100_bases
GCTTGGATAGACTTTGTTCATCAGTTGTCCCTTCCTCTATGGAAACCAGCAAAACCGGTTCACGCGCCACGTGGCGCAAG
CCCGCCGCACCATTCTATGC

Downstream 100 bases:

>100_bases
GCGCGCATTGCGTCGCAGCGCTCGAATGACGATCGGCCGCACGCGGCGGCCGACCGGGGGAAACAACGGGCACGGCGCGC
CACCGGCGACCCGGTGCCGG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Two-Component Sensor; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcription Regulator Protein; LuxR Family Regulatory Protein; Transcriptional Regulator Luxr Family; Diguanylate Cyclase/Phosphodiesterase; PAS Domain-Containing Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRGNACVEARCFYVATHRREMPERVRCGADAAQYAKIHKHFPPPACAMPDLDYQTAFHLAPLGLVLSRDRVIEDCNDALA
SIFRCARADLIGKSYAVLYPSTDEFQRIGERIARVMVANGVYSDDRIMKRADGELFWCHVTGRALDRTAPLAAGVWTFED
LSATRRVAVELTPREREIAAQLATGKTSKQIGRVLDISSRTVDIYRARLMRKYGTNNTPELLQRLLGQ

Sequences:

>Translated_228_residues
MRGNACVEARCFYVATHRREMPERVRCGADAAQYAKIHKHFPPPACAMPDLDYQTAFHLAPLGLVLSRDRVIEDCNDALA
SIFRCARADLIGKSYAVLYPSTDEFQRIGERIARVMVANGVYSDDRIMKRADGELFWCHVTGRALDRTAPLAAGVWTFED
LSATRRVAVELTPREREIAAQLATGKTSKQIGRVLDISSRTVDIYRARLMRKYGTNNTPELLQRLLGQ
>Mature_228_residues
MRGNACVEARCFYVATHRREMPERVRCGADAAQYAKIHKHFPPPACAMPDLDYQTAFHLAPLGLVLSRDRVIEDCNDALA
SIFRCARADLIGKSYAVLYPSTDEFQRIGERIARVMVANGVYSDDRIMKRADGELFWCHVTGRALDRTAPLAAGVWTFED
LSATRRVAVELTPREREIAAQLATGKTSKQIGRVLDISSRTVDIYRARLMRKYGTNNTPELLQRLLGQ

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25646; Mature: 25646

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNACVEARCFYVATHRREMPERVRCGADAAQYAKIHKHFPPPACAMPDLDYQTAFHLA
CCCCCCHHHHEEEEEHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
PLGLVLSRDRVIEDCNDALASIFRCARADLIGKSYAVLYPSTDEFQRIGERIARVMVANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCC
VYSDDRIMKRADGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRRVAVELTPREREIAA
CCCCHHHHHHCCCCEEEEEECCCHHHCCCCHHHCCCCHHHHHHCCEEEEEECCCHHHHHH
QLATGKTSKQIGRVLDISSRTVDIYRARLMRKYGTNNTPELLQRLLGQ
HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRGNACVEARCFYVATHRREMPERVRCGADAAQYAKIHKHFPPPACAMPDLDYQTAFHLA
CCCCCCHHHHEEEEEHHHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
PLGLVLSRDRVIEDCNDALASIFRCARADLIGKSYAVLYPSTDEFQRIGERIARVMVANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCC
VYSDDRIMKRADGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRRVAVELTPREREIAA
CCCCHHHHHHCCCCEEEEEECCCHHHCCCCHHHCCCCHHHHHHCCEEEEEECCCHHHHHH
QLATGKTSKQIGRVLDISSRTVDIYRARLMRKYGTNNTPELLQRLLGQ
HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA