Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689485

Identifier: 116689485

GI number: 116689485

Start: 1618500

End: 1618940

Strand: Direct

Name: 116689485

Synonym: Bcen2424_1463

Alternate gene names: NA

Gene position: 1618500-1618940 (Clockwise)

Preceding gene: 116689484

Following gene: 116689487

Centisome position: 46.46

GC content: 64.85

Gene sequence:

>441_bases
ATGAGCGCAACAAGCGATTACTCCCCCGTTTTTGAGATGTCGATGCCGATCCGCTGGGGCGACATGGACGCGTTTGGTCA
TGTCAACAACACGGTCTATTTCCGCTACATGGAGCAGGCGCGGATTTCGTGGTTCGAGCAACTCGGCATTGCCGGCGGCA
ACGGCGAGGGGCAGGGGCCCGTCATCGTCACCGCGTCGATGGAATTCCTCAAGCAGCTGCACTATCCGGGCGACGTGATC
GCGAGGATGTCGGCCGCGAAGCCCGGCCGAAGCAGTTTCGACACCGGGTTCGAGCTCACGCGCGCGGACGATCCGCAGCA
TGTCTACGCACGCGGCAACGCGCGCTGCGTGTGGGTCGACTACGCGCTCGGCAAGTCGGTGCCGCTGCCGCCCCTGCTGC
GCGACACGATCGAGCGCGCGCTCGCGGCGAAAGTCGGCTGA

Upstream 100 bases:

>100_bases
CGGCCGACGAGTCGCAGTTCATCAATGGCTCGATCATCTCCGCGGACGACGGCTTCGGCCTCGCCTGAGCGGGTGACATT
CAGCAACAAAGAAGACTGCA

Downstream 100 bases:

>100_bases
GCGCGCATACCGGCAGGCCGGCACCGGGTCGCCGGTGGCGCGCCGTGCCCGTTGTTTCCCCCGGTCGGCCGCCGCGTGCG
GCCGATCGTCATTCGAGCGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thiesterase; Thioesterase Family Protein Domain Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSATSDYSPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEQARISWFEQLGIAGGNGEGQGPVIVTASMEFLKQLHYPGDVI
ARMSAAKPGRSSFDTGFELTRADDPQHVYARGNARCVWVDYALGKSVPLPPLLRDTIERALAAKVG

Sequences:

>Translated_146_residues
MSATSDYSPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEQARISWFEQLGIAGGNGEGQGPVIVTASMEFLKQLHYPGDVI
ARMSAAKPGRSSFDTGFELTRADDPQHVYARGNARCVWVDYALGKSVPLPPLLRDTIERALAAKVG
>Mature_145_residues
SATSDYSPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEQARISWFEQLGIAGGNGEGQGPVIVTASMEFLKQLHYPGDVIA
RMSAAKPGRSSFDTGFELTRADDPQHVYARGNARCVWVDYALGKSVPLPPLLRDTIERALAAKVG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16134; Mature: 16003

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSDYSPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEQARISWFEQLGIAGGNGEGQGP
CCCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC
VIVTASMEFLKQLHYPGDVIARMSAAKPGRSSFDTGFELTRADDPQHVYARGNARCVWVD
EEEEECHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEE
YALGKSVPLPPLLRDTIERALAAKVG
ECCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SATSDYSPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEQARISWFEQLGIAGGNGEGQGP
CCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC
VIVTASMEFLKQLHYPGDVIARMSAAKPGRSSFDTGFELTRADDPQHVYARGNARCVWVD
EEEEECHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEE
YALGKSVPLPPLLRDTIERALAAKVG
ECCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA