Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689414
Identifier: 116689414
GI number: 116689414
Start: 1536979
End: 1537239
Strand: Reverse
Name: 116689414
Synonym: Bcen2424_1392
Alternate gene names: NA
Gene position: 1537239-1536979 (Counterclockwise)
Preceding gene: 116689416
Following gene: 116689413
Centisome position: 44.12
GC content: 68.97
Gene sequence:
>261_bases ATGAAACCGTATGTCTTCTCGCTGCTCGCCGGCATCCTCGCCGGCGTGATCTACGGCGCGATCGGCGTGAATTCGCCCGC ACCGCCGATCATCGCGCTCGTCGGCCTGCTCGGCATGCTGGCCGGCGAACAGATCCTGCCCGTCGCGCGCCGGATGCTGT CCGGCCATCGGCTGAACACCGCATGGCGCGACGCGCAGTGCAGCCAGCACATGTTCGGCGCGCTGCCGGGCGGCGCCGCG AACGACCGCAAGCCTTCTTGA
Upstream 100 bases:
>100_bases GGGGCTGCCCGCCCTTTTTTTCTTCACGCAAACCCGCTACGCTTTCAAGACTCTGACGGCGCCGTTCCGGCGCCGCTCGG CCATCACGAGGCGCACCACC
Downstream 100 bases:
>100_bases TCCACCCCATCGCCGCCGGCCGCGCATGACCAACGTCGAGCTGTTCCATTACCTGTTGCTGTTGATCTGCGGCGCGGGCG CCCTCACCTGGCTCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKPYVFSLLAGILAGVIYGAIGVNSPAPPIIALVGLLGMLAGEQILPVARRMLSGHRLNTAWRDAQCSQHMFGALPGGAA NDRKPS
Sequences:
>Translated_86_residues MKPYVFSLLAGILAGVIYGAIGVNSPAPPIIALVGLLGMLAGEQILPVARRMLSGHRLNTAWRDAQCSQHMFGALPGGAA NDRKPS >Mature_86_residues MKPYVFSLLAGILAGVIYGAIGVNSPAPPIIALVGLLGMLAGEQILPVARRMLSGHRLNTAWRDAQCSQHMFGALPGGAA NDRKPS
Specific function: Unknown
COG id: COG4317
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8967; Mature: 8967
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYVFSLLAGILAGVIYGAIGVNSPAPPIIALVGLLGMLAGEQILPVARRMLSGHRLNT CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC AWRDAQCSQHMFGALPGGAANDRKPS HHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKPYVFSLLAGILAGVIYGAIGVNSPAPPIIALVGLLGMLAGEQILPVARRMLSGHRLNT CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC AWRDAQCSQHMFGALPGGAANDRKPS HHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA