Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yeaD [C]
Identifier: 116689340
GI number: 116689340
Start: 1449740
End: 1450651
Strand: Reverse
Name: yeaD [C]
Synonym: Bcen2424_1318
Alternate gene names: 116689340
Gene position: 1450651-1449740 (Counterclockwise)
Preceding gene: 116689342
Following gene: 116689339
Centisome position: 41.64
GC content: 70.29
Gene sequence:
>912_bases ATGCCGATCTTCCAGCAACACGACATTCACGAACTTCACGCCGGCCCGTCGCTCGTCCGGGTCGCCCCGCAATTCGGCGG CCGCCTGCTGTCCTGGCACGTCGATGGCGAACCGGTGATCTTCTGGCCGGAAACCGCCGACTGGAGCAACCTCGCCCGCG TGCGCGGCGGCAATCCGCTGCTGTTCCCGTTCCTCGGCCGCCACCGCGTCGACGGCGAGATCGGCCGCTGGCGCGACGCC GCCGGCGTGGTCCGCGACTTGCCGATGCACGGCTTCGCGCGCGATCTGCCGTTCGACGCGCAGCCGTCGGCCGACGGCGC CGCGCTGTCGATGACGCTCGACGCGAACGACGCGCTGCGCGCGAGCTACCCGTTCGATTTCCGGTTCGAAACCACGTACC GGCTGGCCGACGCGCATACGCTCGACGTCGCGCTGACGACGACCAATCGCGGCGACACGCCGCTGCCCTACTACGCCGGC CACCATTTCTACTTTGCGCTACCGCACGGCGAGCGGGCCGACACCCTCCTCGAGCTGCCGCCGACCCGCCGTTGCCAGCA GCGCGCGGACGGCTCGATCAGCCCGCCCGAACCGGGTGAAGCCCGCTACCGCCTCGACGATCCGGACATCCTCGACCGCT TCCACTGCCTCGACGGTACGCCGTCCACGCCAGTGCGCATCGTGATGCCGAGCCGCCGCCGCACGATCGAGATCGCGCTG GACGTGCCGGGCTCGATCCCGTGGTACGCGGTCACCACCTGGACCGAAAAGCCGGATTCGGACTTCTATTGCGTCGAGCC GTGGCTCGGCCTGCCCGATGCGATCCACAACGGCCTCGGCCTGCGCATGCTCGCGCCGGGCGCGACCGAAACGGCCACGC TGCGAATCCGCGTGATCCCGCTCGCCGGCTGA
Upstream 100 bases:
>100_bases GTTAAAAACTCGCAATTTCCCGAGAAGGGTTTTCCCCGACCGGCCGCGGCCCGATAATGGAACGCCCGTTGCTCCCGTCA CCCGCCCAACCCGATTCGCC
Downstream 100 bases:
>100_bases TTCGACACGCACCGACGCGGGGCGCGACAGCCGCGCCAGCGCCGAAACTGCGGTGCGCGGGTCGAACCCGTTAAAATCGG ACGTTTTGTGTTGCCTGCCG
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose Mutarotase-Like Protein; Galactose Mutarotase; Aldose 1-Epimerase Family Protein; Aldose 1-Epimerase Subfamily Protein; Galactose Mutarotase-Related; Aldose 1-Epimerase Subfamily; Aldose Epimerase; Aldose 1-Epimerase/Galactose Mutarotase; Aldose Epimerase Or Galactose Mutarotase
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPIFQQHDIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGEIGRWRDA AGVVRDLPMHGFARDLPFDAQPSADGAALSMTLDANDALRASYPFDFRFETTYRLADAHTLDVALTTTNRGDTPLPYYAG HHFYFALPHGERADTLLELPPTRRCQQRADGSISPPEPGEARYRLDDPDILDRFHCLDGTPSTPVRIVMPSRRRTIEIAL DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVIPLAG
Sequences:
>Translated_303_residues MPIFQQHDIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGEIGRWRDA AGVVRDLPMHGFARDLPFDAQPSADGAALSMTLDANDALRASYPFDFRFETTYRLADAHTLDVALTTTNRGDTPLPYYAG HHFYFALPHGERADTLLELPPTRRCQQRADGSISPPEPGEARYRLDDPDILDRFHCLDGTPSTPVRIVMPSRRRTIEIAL DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVIPLAG >Mature_302_residues PIFQQHDIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGEIGRWRDAA GVVRDLPMHGFARDLPFDAQPSADGAALSMTLDANDALRASYPFDFRFETTYRLADAHTLDVALTTTNRGDTPLPYYAGH HFYFALPHGERADTLLELPPTRRCQQRADGSISPPEPGEARYRLDDPDILDRFHCLDGTPSTPVRIVMPSRRRTIEIALD VPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVIPLAG
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33801; Mature: 33669
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFQQHDIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPL CCCCCCCCCHHHHCCCCEEEECHHHCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCEE LFPFLGRHRVDGEIGRWRDAAGVVRDLPMHGFARDLPFDAQPSADGAALSMTLDANDALR EEECCCCEECCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCEE ASYPFDFRFETTYRLADAHTLDVALTTTNRGDTPLPYYAGHHFYFALPHGERADTLLELP ECCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCCEEEECC PTRRCQQRADGSISPPEPGEARYRLDDPDILDRFHCLDGTPSTPVRIVMPSRRRTIEIAL CCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVIP ECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEE LAG ECC >Mature Secondary Structure PIFQQHDIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPL CCCCCCCCHHHHCCCCEEEECHHHCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCEE LFPFLGRHRVDGEIGRWRDAAGVVRDLPMHGFARDLPFDAQPSADGAALSMTLDANDALR EEECCCCEECCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCEE ASYPFDFRFETTYRLADAHTLDVALTTTNRGDTPLPYYAGHHFYFALPHGERADTLLELP ECCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCCEEEECC PTRRCQQRADGSISPPEPGEARYRLDDPDILDRFHCLDGTPSTPVRIVMPSRRRTIEIAL CCHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVIP ECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEE LAG ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA