Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689337

Identifier: 116689337

GI number: 116689337

Start: 1446527

End: 1446877

Strand: Reverse

Name: 116689337

Synonym: Bcen2424_1315

Alternate gene names: NA

Gene position: 1446877-1446527 (Counterclockwise)

Preceding gene: 116689338

Following gene: 116689336

Centisome position: 41.53

GC content: 67.52

Gene sequence:

>351_bases
GTGGCGCCACGCAGTCTTTCCAAGAAACCGATGTCCTCTGATCAACACGCCGCGGGCGCGTCGCACAGCCCGCTCTACGC
CAAACTCCTCGGCGAAACCGCCAAGATCGACTGGTGCGATCTCGAACGCTTCTTCGCGCAGGGCAAGCTGCTGTCGATCG
CGCGCGACCTCGATCTCGTCAGCGTCGCGGAAGCGGTTGCCAGCGACGATGCCGAACAGGTCACGCGCTGGCTGTCGTCC
GGCCTCGTCGCGCGCATGCCGGCCGAAACCGCCGCCGACTACGCGGCGCGCAATCCGGAGCTGTGGGCGGTCGTCGTCTC
GCCGTGGGTCTGCGTGCAGGAACGCGCCTGA

Upstream 100 bases:

>100_bases
CAGCCTGCCGATGACCGCGACCGGCAAGATCATCCGGCGCGCGCTGCGCGACGCGTGAGCGCCCCGCTGCCGCTCGGCCC
GCCCGGCCGGATGGTTTATA

Downstream 100 bases:

>100_bases
CGCATCCGTCATGTCCGAATCCGCCTTACCGCTCGGGGCCGGCAGCGCGTCGGCCGCCGTCACGCATCGGCGCGTCCTCG
CGCTCGCTTTCCCGATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAPRSLSKKPMSSDQHAAGASHSPLYAKLLGETAKIDWCDLERFFAQGKLLSIARDLDLVSVAEAVASDDAEQVTRWLSS
GLVARMPAETAADYAARNPELWAVVVSPWVCVQERA

Sequences:

>Translated_116_residues
MAPRSLSKKPMSSDQHAAGASHSPLYAKLLGETAKIDWCDLERFFAQGKLLSIARDLDLVSVAEAVASDDAEQVTRWLSS
GLVARMPAETAADYAARNPELWAVVVSPWVCVQERA
>Mature_115_residues
APRSLSKKPMSSDQHAAGASHSPLYAKLLGETAKIDWCDLERFFAQGKLLSIARDLDLVSVAEAVASDDAEQVTRWLSSG
LVARMPAETAADYAARNPELWAVVVSPWVCVQERA

Specific function: Unknown

COG id: COG5626

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12599; Mature: 12468

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRSLSKKPMSSDQHAAGASHSPLYAKLLGETAKIDWCDLERFFAQGKLLSIARDLDLV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SVAEAVASDDAEQVTRWLSSGLVARMPAETAADYAARNPELWAVVVSPWVCVQERA
HHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEECCEEEECCCC
>Mature Secondary Structure 
APRSLSKKPMSSDQHAAGASHSPLYAKLLGETAKIDWCDLERFFAQGKLLSIARDLDLV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SVAEAVASDDAEQVTRWLSSGLVARMPAETAADYAARNPELWAVVVSPWVCVQERA
HHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA