Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is modB [H]
Identifier: 116689255
GI number: 116689255
Start: 1363404
End: 1364228
Strand: Reverse
Name: modB [H]
Synonym: Bcen2424_1233
Alternate gene names: 116689255
Gene position: 1364228-1363404 (Counterclockwise)
Preceding gene: 116689256
Following gene: 116689254
Centisome position: 39.16
GC content: 68.48
Gene sequence:
>825_bases ATGCTCGACCTGACTTTTCCGCTGCGCTGGCGCGTCGCGCTCGTCGCGCCGGCGCTCGCGGTATTCGCCGCGTTCTGGCT GCTGCCGATGGCGTCGCTCGTGCAGGTGTCCGCCGATGGCGCCTTCTTCTCGCACTACGCGGCGCTGCTCGGCAATGCAC GCTACATGAAGAGCCTCGGCGAGACGGTGGCGCTGTCCGCGGGCGTCACGCTCGCGACGCTCGCGCTGTCGACGATCTCC GGCCTGCTGCTCGCACGCCGCGAATTCGCCGGCAAGCGCGTGCTGCTCGCGCTGCTGACGTTTCCGCTCGCGTTCCCGGG TGTCGTGGTCGGCTTCATGGTGATCATGCTCGCCGGACGCCAGGGGCTGATCGGCATGCTGTCTGCGAAGCTCACCGGCG ACAAGTTCGTATTCGCGTATTCGGTGGCGGGCCTGTTCATCGGCTACCTGTACTTCTCGATTCCGCGCGTGATCGTCACC GTGATCGCGGCCGCGTCGAAGCTCGACGCGTCGCTCGAGGAAGCCGCGCGTTCGCTCGGCGCGTCGCCGTGGCGCATCTT CGTCGACATCGTGCTGCCCGCGCTCACGCCGGGCCTGATCGCGGCCGGCGCGATCTGCTTCGCGACCGCGATGGGTGCGT TCGGCACCGCGTTCACGCTCGCCACCGACCTGAACGTATTGCCGATGACGATCTACACCGAGTTCACGCTGAACGCGAAC ATCGCAACGGCGGCCGGCCTGTCGATCGTGCTCGGCGTCGTCACCTGGGCCGTGCTCGCGCTCGCACGACGCTTCACCGG TCACACCGCCGCCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCGAGCGAAATCGGTCGACTTCGGCAAGATGGCGGCCGGCCAGCAGGTGTTCGGCCAGCAGTACCTGCAAGTGATGCAG TAAGCGGCCGGCCCCACGTC
Downstream 100 bases:
>100_bases GGAATTCCGCATGACATCGCTTTCCGGCTCTTCCGCGCCCTCCCCGGCACCTGTGCCGGCTTCCCTGCCAGCGAAACCTG CCGCCCGGCACGCGCCGCGG
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMASLVQVSADGAFFSHYAALLGNARYMKSLGETVALSAGVTLATLALSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKFVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALTPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGVVTWAVLALARRFTGHTAAAAA
Sequences:
>Translated_274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMASLVQVSADGAFFSHYAALLGNARYMKSLGETVALSAGVTLATLALSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKFVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALTPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGVVTWAVLALARRFTGHTAAAAA >Mature_274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMASLVQVSADGAFFSHYAALLGNARYMKSLGETVALSAGVTLATLALSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKFVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALTPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGVVTWAVLALARRFTGHTAAAAA
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=142, Percent_Identity=33.8028169014084, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786980, Length=172, Percent_Identity=34.3023255813954, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786254, Length=198, Percent_Identity=25.2525252525253, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28609; Mature: 28609
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLTFPLRWRVALVAPALAVFAAFWLLPMASLVQVSADGAFFSHYAALLGNARYMKSLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHC ETVALSAGVTLATLALSTISGLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGLIGMLSAKLTGDKFVFAYSVAGLFIGYLYFSIPRVIVTVIAAASKLDASLEEAARSLG CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASPWRIFVDIVLPALTPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC IATAAGLSIVLGVVTWAVLALARRFTGHTAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MLDLTFPLRWRVALVAPALAVFAAFWLLPMASLVQVSADGAFFSHYAALLGNARYMKSLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHC ETVALSAGVTLATLALSTISGLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGLIGMLSAKLTGDKFVFAYSVAGLFIGYLYFSIPRVIVTVIAAASKLDASLEEAARSLG CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASPWRIFVDIVLPALTPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC IATAAGLSIVLGVVTWAVLALARRFTGHTAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]