Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689249
Identifier: 116689249
GI number: 116689249
Start: 1357063
End: 1357416
Strand: Reverse
Name: 116689249
Synonym: Bcen2424_1227
Alternate gene names: NA
Gene position: 1357416-1357063 (Counterclockwise)
Preceding gene: 116689251
Following gene: 116689248
Centisome position: 38.96
GC content: 63.84
Gene sequence:
>354_bases TTGTATAATCCAGACATTCTTCCGCCGAAGCCCGTCGTTTTCGTCGGCAGCGCGCTGGCCGATCTCCGCGGCTTTCCGTT GCCTGCGCGACGCGAAGCCGGCCACCAGATCGACCAGGTGCAGCGCGGCCTCGCACCCGACGACTGGAAACCGATGCGCA CGATCGGCGTCGGCGTGCGGGAAATTCGCCTGCGCGATGCGAGCGGCGCATTCCGGGTCGTCTACGTCGCGACTTTCGCC GAGGCCGTCTACGTCCTGCATTGCTTCCGCAAGCAATCGACGCGCACGAACAAGACCGATATCGACCTCGCCGCCCGCCG CTATCGGACGCTGATGATGGAGTTGAAACGATGA
Upstream 100 bases:
>100_bases GTGCATCGGTGCGCCGTGACGCGCCTATCGTGACGGACGGCGCGCGCCCCTGGCGGCGCCCGCAGCTTCTTTCCGCCACC TGCACAGCCCATACAAAATT
Downstream 100 bases:
>100_bases CCAATGAACGCTACGCGAACGTCTGGGACGCAATCGAAAGCGAGCCGGCGGAAGCCGCGAACATGAAGCTGCGCTCCGAA CTGATGATCGCGCTCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MYNPDILPPKPVVFVGSALADLRGFPLPARREAGHQIDQVQRGLAPDDWKPMRTIGVGVREIRLRDASGAFRVVYVATFA EAVYVLHCFRKQSTRTNKTDIDLAARRYRTLMMELKR
Sequences:
>Translated_117_residues MYNPDILPPKPVVFVGSALADLRGFPLPARREAGHQIDQVQRGLAPDDWKPMRTIGVGVREIRLRDASGAFRVVYVATFA EAVYVLHCFRKQSTRTNKTDIDLAARRYRTLMMELKR >Mature_117_residues MYNPDILPPKPVVFVGSALADLRGFPLPARREAGHQIDQVQRGLAPDDWKPMRTIGVGVREIRLRDASGAFRVVYVATFA EAVYVLHCFRKQSTRTNKTDIDLAARRYRTLMMELKR
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13342; Mature: 13342
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: PS00097 CARBAMOYLTRANSFERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNPDILPPKPVVFVGSALADLRGFPLPARREAGHQIDQVQRGLAPDDWKPMRTIGVGVR CCCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCHHHHHCCHH EIRLRDASGAFRVVYVATFAEAVYVLHCFRKQSTRTNKTDIDLAARRYRTLMMELKR HEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYNPDILPPKPVVFVGSALADLRGFPLPARREAGHQIDQVQRGLAPDDWKPMRTIGVGVR CCCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCHHHHHCCHH EIRLRDASGAFRVVYVATFAEAVYVLHCFRKQSTRTNKTDIDLAARRYRTLMMELKR HEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA