Click here to switch to the map view.

The map label for this gene is 116689248

Identifier: 116689248

GI number: 116689248

Start: 1356785

End: 1357066

Strand: Reverse

Name: 116689248

Synonym: Bcen2424_1226

Alternate gene names: NA

Gene position: 1357066-1356785 (Counterclockwise)

Preceding gene: 116689249

Following gene: 116689245

Centisome position: 38.95

GC content: 64.54

Gene sequence:

>282_bases
ATGACCAATGAACGCTACGCGAACGTCTGGGACGCAATCGAAAGCGAGCCGGCGGAAGCCGCGAACATGAAGCTGCGCTC
CGAACTGATGATCGCGCTCAAGCAGCGCATCGCGCGGCTCGAACTGAGTCAGGCCGAGGCCGCGAAGCAGCTGGGCGTCA
CGCAGCCGCGCGTCTCCGACCTGATGCGCGGCAAGATCAACCTGTTCGGGCTCGACGCGCTCGTGAACATGGCCTCGGCA
GTCGGCCTGCGCGTCGATCTCCAGGTGCGCGAATCCGTATGA

Upstream 100 bases:

>100_bases
ACGTCCTGCATTGCTTCCGCAAGCAATCGACGCGCACGAACAAGACCGATATCGACCTCGCCGCCCGCCGCTATCGGACG
CTGATGATGGAGTTGAAACG

Downstream 100 bases:

>100_bases
CGCGTGCGCACGCCGTGCACGCCGCGCGCACAGCTCACGAGCCGCCGAACCAGTTGTAGCCCTGATCGACCCAGTAGCCG
CCCGGGAACGTATCCGTCAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator XRE Family; Conserved Small Protein; Phage Associated Protein; Transcriptional Regulator XRE Family Protein

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MTNERYANVWDAIESEPAEAANMKLRSELMIALKQRIARLELSQAEAAKQLGVTQPRVSDLMRGKINLFGLDALVNMASA
VGLRVDLQVRESV

Sequences:

>Translated_93_residues
MTNERYANVWDAIESEPAEAANMKLRSELMIALKQRIARLELSQAEAAKQLGVTQPRVSDLMRGKINLFGLDALVNMASA
VGLRVDLQVRESV
>Mature_92_residues
TNERYANVWDAIESEPAEAANMKLRSELMIALKQRIARLELSQAEAAKQLGVTQPRVSDLMRGKINLFGLDALVNMASAV
GLRVDLQVRESV

Specific function: Unknown

COG id: COG5606

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10312; Mature: 10181

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNERYANVWDAIESEPAEAANMKLRSELMIALKQRIARLELSQAEAAKQLGVTQPRVSD
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LMRGKINLFGLDALVNMASAVGLRVDLQVRESV
HHHCCCCEEHHHHHHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure 
TNERYANVWDAIESEPAEAANMKLRSELMIALKQRIARLELSQAEAAKQLGVTQPRVSD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LMRGKINLFGLDALVNMASAVGLRVDLQVRESV
HHHCCCCEEHHHHHHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA