Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689244
Identifier: 116689244
GI number: 116689244
Start: 1352043
End: 1352255
Strand: Reverse
Name: 116689244
Synonym: Bcen2424_1222
Alternate gene names: NA
Gene position: 1352255-1352043 (Counterclockwise)
Preceding gene: 116689245
Following gene: 116689243
Centisome position: 38.81
GC content: 68.54
Gene sequence:
>213_bases ATGAATTCGATTCGGCGTTTTGGGGTATGCGCGCTCCTCGTCGCGACAGTGGCCAGCCTGTCGGCCTGCGATTCGATGTC GCGACGCCAGCGCGATACGGCAATCGGTGCAGGTGTCGGCGGCGTGGCCGGCGCGGCGATCGGCGGCAACGCGCTGTCGA CGCTGGGCGGCGCGGCGGCCGGCGGCATCATCGGTAACCAGGTCGGCAAGTAA
Upstream 100 bases:
>100_bases AGTCCTTACAGCAGCGTCGCGGGACGGCGCGTAGATTGAAGTCATGCGCGGCCGCCAGCCGGTCGTGCGCCTTCCGTTCA CTACCACAAGGACAACGATC
Downstream 100 bases:
>100_bases CGAGCGCGACATCGGCCGGTTGGGCGTCGCCCAGTTGCTGGCCGGTCGGTTCAACGGCGTTTCCGCGGTGCGGAAGCGCC GTTTTCGTATGCGTGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MNSIRRFGVCALLVATVASLSACDSMSRRQRDTAIGAGVGGVAGAAIGGNALSTLGGAAAGGIIGNQVGK
Sequences:
>Translated_70_residues MNSIRRFGVCALLVATVASLSACDSMSRRQRDTAIGAGVGGVAGAAIGGNALSTLGGAAAGGIIGNQVGK >Mature_70_residues MNSIRRFGVCALLVATVASLSACDSMSRRQRDTAIGAGVGGVAGAAIGGNALSTLGGAAAGGIIGNQVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6647; Mature: 6647
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIRRFGVCALLVATVASLSACDSMSRRQRDTAIGAGVGGVAGAAIGGNALSTLGGAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCHHH GGIIGNQVGK CCCCCCCCCC >Mature Secondary Structure MNSIRRFGVCALLVATVASLSACDSMSRRQRDTAIGAGVGGVAGAAIGGNALSTLGGAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCHHH GGIIGNQVGK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA