Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689243
Identifier: 116689243
GI number: 116689243
Start: 1351572
End: 1351826
Strand: Reverse
Name: 116689243
Synonym: Bcen2424_1221
Alternate gene names: NA
Gene position: 1351826-1351572 (Counterclockwise)
Preceding gene: 116689244
Following gene: 116689242
Centisome position: 38.8
GC content: 68.24
Gene sequence:
>255_bases ATGAACAGGACCTTCGTCGCCGCGGCGCTTGCCTGCACGACGCTTGCCGGCTGCTACTACCCCTACGGCTACTATCCGGG CGGCTATTACACGGCGGCGCCGGTGCCGGTACAGCCCGCGCCCGTGTATGTCGATCCGGCCCCCACCTACTACTATCCGG CGCCGGCGTATGCGCCCGCGTGGGGCGGTTACTGGGGCCCGGCGTTGTCGCTCAATTTCGGTTTCGGCGGACGCGGCGGC TGGCGTCATCACTGA
Upstream 100 bases:
>100_bases CGCCCGGAAATGATCGGTTACCGTTTTTCATACCGTGTCATCGGTACGCGGCCTAAGCTTGAAGCATCTGCCGATGGCCG GCTTCCGCCGGAGACACATC
Downstream 100 bases:
>100_bases TCGGCCGCGCCGCACGCGGCCGGTTACTCGCCCGGAGCAGCAAGCGGCGGAATTCCCGTTTCTTGTCGTTTCATCCGATC CTGAAACGACGGTGCGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MNRTFVAAALACTTLAGCYYPYGYYPGGYYTAAPVPVQPAPVYVDPAPTYYYPAPAYAPAWGGYWGPALSLNFGFGGRGG WRHH
Sequences:
>Translated_84_residues MNRTFVAAALACTTLAGCYYPYGYYPGGYYTAAPVPVQPAPVYVDPAPTYYYPAPAYAPAWGGYWGPALSLNFGFGGRGG WRHH >Mature_84_residues MNRTFVAAALACTTLAGCYYPYGYYPGGYYTAAPVPVQPAPVYVDPAPTYYYPAPAYAPAWGGYWGPALSLNFGFGGRGG WRHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9077; Mature: 9077
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTFVAAALACTTLAGCYYPYGYYPGGYYTAAPVPVQPAPVYVDPAPTYYYPAPAYAPA CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCC WGGYWGPALSLNFGFGGRGGWRHH CCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MNRTFVAAALACTTLAGCYYPYGYYPGGYYTAAPVPVQPAPVYVDPAPTYYYPAPAYAPA CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCC WGGYWGPALSLNFGFGGRGGWRHH CCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA