Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624453
Identifier: 116624453
GI number: 116624453
Start: 6734642
End: 6735940
Strand: Reverse
Name: 116624453
Synonym: Acid_5375
Alternate gene names: NA
Gene position: 6735940-6734642 (Counterclockwise)
Preceding gene: 116624458
Following gene: 116624443
Centisome position: 67.59
GC content: 61.89
Gene sequence:
>1299_bases ATGGGAGCTTGGGGAGTTTTGGCTGCTCCCCTACCGAAAGAGGCGACGTTCCACAAACATGTGGAGCCGGTGCTACAGGC ACGCTGCCAGAATTGCCATCGTCCGGGCGAGGCGGCGCCAATGTCGCTGCTGACTTATAAAGACGCGCGTCCGTGGGCGA AGGCGATCAAGGAGGCGGTGCTGGTACGCAAGATGCCGCCATGGTTCGCCGATCCGAAGCATGGGGAGTTCGCCAACGAT CGCCGGCTGTCGCAGGAAGAAATCGACACGCTGACGGCGTGGGTGGACGGAGGGGCGAAAGAGGGCGACCCGAAGGACGC GCCGAAGCCGTTGACCTTCGCGGAGGGGTGGTCGATCGGGAAACCAGACGCGATTGTCGAAATGCCGACGGCCGTGGAGG TCCCGGCGTCGGGGACGGTGGACTATACCTATATCGTGGTGCCGACGGGGTTCACGGAAGACAAATGGGTGGACCGCGTG GAGGTGCGGCCGGGCGCTAAGAGCGTGGTGCATCATATCGTGATGCTGGTGCGGCCGCCGGGAGTGAAGTACATGGCGGA CGCCAAGCCGGGGATTCCGTATATTCCGCCGAAGCAGGAAGGCAAGCACCAGGAAGACACGGGGCGCGGCCAGTTCCAGT TCACAGGCGCGATCGAGATGATCGGGGTTTACGTGCCGGGCGGACTGGCGTACGAAGTGGGGCCGGGGCAGGCGCGGTTC ATTCCGAAGGGGTCGGACGTGATCTTCCAGATGCATTACACGGCGACGGGAAAGGCGGCGGCTGACCGCAGCCGCATTGG GTTCGTGTTCTCCAAAGAGCCGCCGAAAGAGCGGGTGGTAAATACCTTTGTGGGGAACCTGAACCTGCATATTCCTCCGG GGGTGGCGGATCATCCGGTGACAGCGCGAGTGACGCTATATGAGGACACCAAGCTGCTTTCTCTATTCCCGCACATGCAC GTTCGCGGAAAGGCATTCGAGTACAAGGCGACCTATCCGACAGGGGAGACAGAGACGCTGCTGACGGTGCCGAAGTACGA TTTCAACTGGCAGTTGACGTACTATCTGAAAGAGCCGAAGGTGCTGCCGAAAGGCACGGTGCTGGAGTGCGTGGCGCACT TCGACAATTCGGCGAATAATCCCTTTAATCCGGATCCGAAGAGTGACGTGTACTGGGGTGAGCAGACGTGGGAGGAGATG CTGGCTGGTTTTGTGGACCTGGCGATGCCGGTGGGGAAGACGATGCGCGATGTGGCGGCGCCGAAGAAGCCGCAGCCGGC GACGGGCGGAGCGCAGTAG
Upstream 100 bases:
>100_bases CGCACGATCGGGCCGCGGGCCGTGTCAAGGCCCACAGCCGCGTGTGGTAATTTAGGCGATAGAGGGGAAAATCACGATGC GTTTGGGTGTTCTAGTCCTG
Downstream 100 bases:
>100_bases CCGGAGGAATGGCGTCCCCAAGGGGATTCGAACCCCTGTTATCGCCGTGAAAGGGCGGTGTCCTAGGCCAGGCTAGACGA TGGGGACGTGCTGACCAAAA
Product: putative thiol-disulfide isomerase or thioredoxin
Products: NA
Alternate protein names: Monooxygenase; Secreted Protein; TPR Repeat-Containing Protein; Redoxin Domain Protein
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MGAWGVLAAPLPKEATFHKHVEPVLQARCQNCHRPGEAAPMSLLTYKDARPWAKAIKEAVLVRKMPPWFADPKHGEFAND RRLSQEEIDTLTAWVDGGAKEGDPKDAPKPLTFAEGWSIGKPDAIVEMPTAVEVPASGTVDYTYIVVPTGFTEDKWVDRV EVRPGAKSVVHHIVMLVRPPGVKYMADAKPGIPYIPPKQEGKHQEDTGRGQFQFTGAIEMIGVYVPGGLAYEVGPGQARF IPKGSDVIFQMHYTATGKAAADRSRIGFVFSKEPPKERVVNTFVGNLNLHIPPGVADHPVTARVTLYEDTKLLSLFPHMH VRGKAFEYKATYPTGETETLLTVPKYDFNWQLTYYLKEPKVLPKGTVLECVAHFDNSANNPFNPDPKSDVYWGEQTWEEM LAGFVDLAMPVGKTMRDVAAPKKPQPATGGAQ
Sequences:
>Translated_432_residues MGAWGVLAAPLPKEATFHKHVEPVLQARCQNCHRPGEAAPMSLLTYKDARPWAKAIKEAVLVRKMPPWFADPKHGEFAND RRLSQEEIDTLTAWVDGGAKEGDPKDAPKPLTFAEGWSIGKPDAIVEMPTAVEVPASGTVDYTYIVVPTGFTEDKWVDRV EVRPGAKSVVHHIVMLVRPPGVKYMADAKPGIPYIPPKQEGKHQEDTGRGQFQFTGAIEMIGVYVPGGLAYEVGPGQARF IPKGSDVIFQMHYTATGKAAADRSRIGFVFSKEPPKERVVNTFVGNLNLHIPPGVADHPVTARVTLYEDTKLLSLFPHMH VRGKAFEYKATYPTGETETLLTVPKYDFNWQLTYYLKEPKVLPKGTVLECVAHFDNSANNPFNPDPKSDVYWGEQTWEEM LAGFVDLAMPVGKTMRDVAAPKKPQPATGGAQ >Mature_431_residues GAWGVLAAPLPKEATFHKHVEPVLQARCQNCHRPGEAAPMSLLTYKDARPWAKAIKEAVLVRKMPPWFADPKHGEFANDR RLSQEEIDTLTAWVDGGAKEGDPKDAPKPLTFAEGWSIGKPDAIVEMPTAVEVPASGTVDYTYIVVPTGFTEDKWVDRVE VRPGAKSVVHHIVMLVRPPGVKYMADAKPGIPYIPPKQEGKHQEDTGRGQFQFTGAIEMIGVYVPGGLAYEVGPGQARFI PKGSDVIFQMHYTATGKAAADRSRIGFVFSKEPPKERVVNTFVGNLNLHIPPGVADHPVTARVTLYEDTKLLSLFPHMHV RGKAFEYKATYPTGETETLLTVPKYDFNWQLTYYLKEPKVLPKGTVLECVAHFDNSANNPFNPDPKSDVYWGEQTWEEML AGFVDLAMPVGKTMRDVAAPKKPQPATGGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47666; Mature: 47535
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAWGVLAAPLPKEATFHKHVEPVLQARCQNCHRPGEAAPMSLLTYKDARPWAKAIKEAV CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH LVRKMPPWFADPKHGEFANDRRLSQEEIDTLTAWVDGGAKEGDPKDAPKPLTFAEGWSIG HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCC KPDAIVEMPTAVEVPASGTVDYTYIVVPTGFTEDKWVDRVEVRPGAKSVVHHIVMLVRPP CCCCEEECCCEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHEEEECCC GVKYMADAKPGIPYIPPKQEGKHQEDTGRGQFQFTGAIEMIGVYVPGGLAYEVGPGQARF CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEEECCCEEEEECCCCEEE IPKGSDVIFQMHYTATGKAAADRSRIGFVFSKEPPKERVVNTFVGNLNLHIPPGVADHPV EECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCC TARVTLYEDTKLLSLFPHMHVRGKAFEYKATYPTGETETLLTVPKYDFNWQLTYYLKEPK EEEEEEECCCCHHHHCCCCEECCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCC VLPKGTVLECVAHFDNSANNPFNPDPKSDVYWGEQTWEEMLAGFVDLAMPVGKTMRDVAA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHCC PKKPQPATGGAQ CCCCCCCCCCCC >Mature Secondary Structure GAWGVLAAPLPKEATFHKHVEPVLQARCQNCHRPGEAAPMSLLTYKDARPWAKAIKEAV CCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH LVRKMPPWFADPKHGEFANDRRLSQEEIDTLTAWVDGGAKEGDPKDAPKPLTFAEGWSIG HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCC KPDAIVEMPTAVEVPASGTVDYTYIVVPTGFTEDKWVDRVEVRPGAKSVVHHIVMLVRPP CCCCEEECCCEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHEEEECCC GVKYMADAKPGIPYIPPKQEGKHQEDTGRGQFQFTGAIEMIGVYVPGGLAYEVGPGQARF CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEEECCCEEEEECCCCEEE IPKGSDVIFQMHYTATGKAAADRSRIGFVFSKEPPKERVVNTFVGNLNLHIPPGVADHPV EECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCC TARVTLYEDTKLLSLFPHMHVRGKAFEYKATYPTGETETLLTVPKYDFNWQLTYYLKEPK EEEEEEECCCCHHHHCCCCEECCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCC VLPKGTVLECVAHFDNSANNPFNPDPKSDVYWGEQTWEEMLAGFVDLAMPVGKTMRDVAA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHCC PKKPQPATGGAQ CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA