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The map label for this gene is yihM [C]

Identifier: 116624404

GI number: 116624404

Start: 6674894

End: 6676048

Strand: Reverse

Name: yihM [C]

Synonym: Acid_5326

Alternate gene names: 116624404

Gene position: 6676048-6674894 (Counterclockwise)

Preceding gene: 116624405

Following gene: 116624403

Centisome position: 66.99

GC content: 65.02

Gene sequence:

>1155_bases
ATGCGCGATTTGATCCTCGATTCCAGACGTCTCGATCCATCAGAAGCGATCAGTGTGCCTTCAGCGGCCACCGTCAACCA
CCCGGAAGCCAAAAGCTTGCTCAACCTGAGATATACTTCTGGCGACATGACCAGACGCACGCTTTTGGGACTCGCGGCCG
CCGCGCCCTTTGCCGCCGCCGAGCCGCCGCCGCCCGTCAAACTGGGGATCGATCTCTTCAGCCTGCGCTCGCAGAACTGG
ACTCCCTTCCAACTCCTGGAGTACAGCGCCGCGCAGAAAGCGAAGGTCGTACACTTCTCCGAGATCCGCTTCATCGGCAG
CCTGGAGCCCGATAACCTGCGCGCCGTCCGCCGCCGCGCCGAGGAACTCGGAATTCAGGTGGAGATCGGCATGAAATCCA
TCTGCCCCACCTCCAAAATGTTCGACGCCAAGGCCGGGACGGCCGAGGAGCAGATCGCGCGCATGCTGGACGCCGCGAAG
CTGGTCGGCTCCCCGATCGTGCGCGCCGTCCTCGGCAGTTCCGAGGACCGCAAGCCGGGGCCGCTCGAAAAGCACATCGA
GAGCACCGTGCAGGTGCTGCGCAATGTGCGCTCGCGCGTGCAGGACGCTAACCTGAAGATCGCCATCGAGAATCACTCGG
GCGACATGCAGGGCCACGAGCTCAAGCAGCTGATCGAAGCCGCCGGCAGGGAATTCGTCGGCGCCTGCCTGGATTCCGGC
AACCCGGCCTGGACGCTCGAAGATCCGCACGTGACCCTCGACGCGCTCTACCCCTACGTGCTCACCAGCCACGTGCGCGA
TAGCGCTGTGTGGAAGGTGCCGGAAGGCATCGCGGTGGCCTGGGTGCGCATGGGCGAGGGCAACGTCGATATCGATAGCT
ACTGCCGCAAGTACGCGGAGCTTTGTCCGGGGCGCGCGCTCTCGCTCGAATCCATCGTCACCGGTCCGCGTCTCTTCGCC
ACCCGCGATCCCAAATTCTGGGACGCCTACCGCGACATTCCGGCCTGGGATTACGAACGCTTCCTGCAGGTCGCCGAGCG
CGGACAGCCGCGGCCGGCGCCGCCGCGAGCCGCCGACGCCGAGGCCGGAAAGCGCCGCGAACGCGAAGATCTGGAAGCCA
GCGCGGATCACACTCGAAAGCTGCTGGGACTTTAA

Upstream 100 bases:

>100_bases
CCTGCGGAGTACACCGACCCCCTGATCCTCCCCCTGGTCTCGGCCGACCCGGAGTGCCTCCCCTTCAATCCCGACATTTT
CCTGTGAAATCGGCGCGGAA

Downstream 100 bases:

>100_bases
GGAGGGGAATATGAATCGCCGCCAATTTATCCGCGCCGGAACCGCCGGGCTGGGCGCTGCCGCGCTCGGCTTCGCGCAAG
CCGGAAGCACCAAAACGCCG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain Protein; Sugare Isomerase

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRDLILDSRRLDPSEAISVPSAATVNHPEAKSLLNLRYTSGDMTRRTLLGLAAAAPFAAAEPPPPVKLGIDLFSLRSQNW
TPFQLLEYSAAQKAKVVHFSEIRFIGSLEPDNLRAVRRRAEELGIQVEIGMKSICPTSKMFDAKAGTAEEQIARMLDAAK
LVGSPIVRAVLGSSEDRKPGPLEKHIESTVQVLRNVRSRVQDANLKIAIENHSGDMQGHELKQLIEAAGREFVGACLDSG
NPAWTLEDPHVTLDALYPYVLTSHVRDSAVWKVPEGIAVAWVRMGEGNVDIDSYCRKYAELCPGRALSLESIVTGPRLFA
TRDPKFWDAYRDIPAWDYERFLQVAERGQPRPAPPRAADAEAGKRREREDLEASADHTRKLLGL

Sequences:

>Translated_384_residues
MRDLILDSRRLDPSEAISVPSAATVNHPEAKSLLNLRYTSGDMTRRTLLGLAAAAPFAAAEPPPPVKLGIDLFSLRSQNW
TPFQLLEYSAAQKAKVVHFSEIRFIGSLEPDNLRAVRRRAEELGIQVEIGMKSICPTSKMFDAKAGTAEEQIARMLDAAK
LVGSPIVRAVLGSSEDRKPGPLEKHIESTVQVLRNVRSRVQDANLKIAIENHSGDMQGHELKQLIEAAGREFVGACLDSG
NPAWTLEDPHVTLDALYPYVLTSHVRDSAVWKVPEGIAVAWVRMGEGNVDIDSYCRKYAELCPGRALSLESIVTGPRLFA
TRDPKFWDAYRDIPAWDYERFLQVAERGQPRPAPPRAADAEAGKRREREDLEASADHTRKLLGL
>Mature_384_residues
MRDLILDSRRLDPSEAISVPSAATVNHPEAKSLLNLRYTSGDMTRRTLLGLAAAAPFAAAEPPPPVKLGIDLFSLRSQNW
TPFQLLEYSAAQKAKVVHFSEIRFIGSLEPDNLRAVRRRAEELGIQVEIGMKSICPTSKMFDAKAGTAEEQIARMLDAAK
LVGSPIVRAVLGSSEDRKPGPLEKHIESTVQVLRNVRSRVQDANLKIAIENHSGDMQGHELKQLIEAAGREFVGACLDSG
NPAWTLEDPHVTLDALYPYVLTSHVRDSAVWKVPEGIAVAWVRMGEGNVDIDSYCRKYAELCPGRALSLESIVTGPRLFA
TRDPKFWDAYRDIPAWDYERFLQVAERGQPRPAPPRAADAEAGKRREREDLEASADHTRKLLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42488; Mature: 42488

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLILDSRRLDPSEAISVPSAATVNHPEAKSLLNLRYTSGDMTRRTLLGLAAAAPFAAA
CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCC
EPPPPVKLGIDLFSLRSQNWTPFQLLEYSAAQKAKVVHFSEIRFIGSLEPDNLRAVRRRA
CCCCCCEECCHHHHHCCCCCCHHHHHHHHHHHHHEEEEHHHEEEECCCCCHHHHHHHHHH
EELGIQVEIGMKSICPTSKMFDAKAGTAEEQIARMLDAAKLVGSPIVRAVLGSSEDRKPG
HHCCEEEEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLEKHIESTVQVLRNVRSRVQDANLKIAIENHSGDMQGHELKQLIEAAGREFVGACLDSG
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHCCC
NPAWTLEDPHVTLDALYPYVLTSHVRDSAVWKVPEGIAVAWVRMGEGNVDIDSYCRKYAE
CCEEEECCCCEEHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCCCCCHHHHHHHHHH
LCPGRALSLESIVTGPRLFATRDPKFWDAYRDIPAWDYERFLQVAERGQPRPAPPRAADA
HCCCCCCCHHHHHCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
EAGKRREREDLEASADHTRKLLGL
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDLILDSRRLDPSEAISVPSAATVNHPEAKSLLNLRYTSGDMTRRTLLGLAAAAPFAAA
CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCC
EPPPPVKLGIDLFSLRSQNWTPFQLLEYSAAQKAKVVHFSEIRFIGSLEPDNLRAVRRRA
CCCCCCEECCHHHHHCCCCCCHHHHHHHHHHHHHEEEEHHHEEEECCCCCHHHHHHHHHH
EELGIQVEIGMKSICPTSKMFDAKAGTAEEQIARMLDAAKLVGSPIVRAVLGSSEDRKPG
HHCCEEEEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLEKHIESTVQVLRNVRSRVQDANLKIAIENHSGDMQGHELKQLIEAAGREFVGACLDSG
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHCCC
NPAWTLEDPHVTLDALYPYVLTSHVRDSAVWKVPEGIAVAWVRMGEGNVDIDSYCRKYAE
CCEEEECCCCEEHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCCCCCHHHHHHHHHH
LCPGRALSLESIVTGPRLFATRDPKFWDAYRDIPAWDYERFLQVAERGQPRPAPPRAADA
HCCCCCCCHHHHHCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
EAGKRREREDLEASADHTRKLLGL
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA