Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624290
Identifier: 116624290
GI number: 116624290
Start: 6534436
End: 6535845
Strand: Reverse
Name: 116624290
Synonym: Acid_5208
Alternate gene names: NA
Gene position: 6535845-6534436 (Counterclockwise)
Preceding gene: 116624291
Following gene: 116624289
Centisome position: 65.58
GC content: 65.53
Gene sequence:
>1410_bases ATGCCGCGACAGCTCGTCGAATGTGTCCCCAATTTTTCCGAAGGCCGTGACCTCGCCAAAGTCGATGCCATCGTCCAGGC CATCCTCGCCGTCCCCGAGGTCGCCCTCCTCGATCGCGAAATGGACGCCGATCACAACCGCAGCGTCCTCACCTTCGTCG GTCCGCCGGCCGCCGTCGCCGACGCTGCCTTTCGCGCCGTCGAACGCGCCGTCGCGATCATCGATCTCACGCAGCACCAC GGCGCTCATCCCCGCATCGGAGCCGCCGACGTCGTCCCCTTCATCCCCATCGAAGGCGTCACGCTCGAAGAGTGCGTCAA GCTCGCCGAACGTCTCGGCGCCGAGATCTGGAGCAAGCTCAAGGTCCCCGTCTATCTCTACGAGTCCGCCGCCCGCCGCC CCGATCGCACCAATCTGGAAAACATCCGCCGCGGCCAGTTCGAAGCCCTCCTCCAGGAAATGGGCACCGTCCCCGCGCGC GATCCCGATATCGGCGACCCCGTCTGCCACCCCACCGCCGGCGCCATCGTCACCGGCGCGCGCAAATTCCTGATCGCCTA CAACGTCAACCTCAACACGCCCGATCTCTCCATCGCGAAGAAGATCGCCAAGACCATCCGCTTCTCCAACGGCGGCTTCC GCTACGTCAAGTCGATGGGCGTCATGCTCGCCTCCCGCAACCTCGCGCAGGTCTCCATCAACCTCACCGATTTCGAGCAG ACCCCCATGCACCTCGTGTTCGAGACCGTGCGCCGCGAAGCCGAGCGCTACGGCGTCTCCGTAATCGGTAGCGAGATCGT CGGCCTCATTCCCAAGAAGGCCATCGAGCTCTCCGCCGAATACTTCCTCCGCTACGAAAACTTCCGCCCCGAGCTCGTGC TCGAGAACCGGATCGCCGAGGCCCTCGCCACCCGCTCCGGCCTTTCCGAATTCCTCGACGCGCTCGCTTCTCCCGCCGCC ACTCCCGGCGGAGGCAGCGCCGCCGCCGCCGCCGCCGCGATGGCCGCCGCGCTCGGCTCCATGGTCACCCGCCTCGCCAA GCTCGACGCGTCCTCCTTCGAAGACGACCGCCGCTTTTTCACCGAGGCCGCCGACCGCGACGCCGAAGCCTTCAACCTCG TCATGGCCGCCTATAAACGACCCAAGGCCGAACGCGCGCCCTTCGTCGAGGATGCCCTCCACGGCGCCGCCGAAGTTCCG CTCCAGGTGATGGAGCGCGCCCACGCCCTGCAGTCCCGACTACACGCGCTCGAAGTTCCCGCCAAATTCGGCAGCGATCT CGCCGTCGCCAAGTCGCTCGTCGTGGCCGCCTTCCTCGGCGCCCTGGAAAATGTCAAAATCAATCTCGATTCCATTCAAG ACGCAGCCTTCAAAGATCTCGTGATGACCCGCATGGCAGTTCTCAAATGA
Upstream 100 bases:
>100_bases TCGATACACGCATCGTCATCGCCATGCGAACCGCGACCGTCTCTCGCCAACTGGCGAGCAAGGGAGCGATCTAAGATTCC ACGCTACATTAGGAGAGTAA
Downstream 100 bases:
>100_bases GCGATTCCGCCCTCCTCAACTGTCGCCAGCTGGTCACCCTCGCCGGACCTCCGGGCCCGCGCACCGGACCCGCGATGCGC GAGCTCGCCATCATCCCCGA
Product: glutamate formiminotransferase
Products: tetrahydrofolate; N-formimidoyl-L-glutamate
Alternate protein names: Formimidoyltransferase-Cyclodeaminase; Glutamate Formimidoyltransferase; Formiminotransferase-Cyclodeaminase; Formiminotransferase Domain Protein; Formiminotransferase-Cyclodeaminase-Related Protein; Formiminotransferase-Like; Formiminotransferase
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MPRQLVECVPNFSEGRDLAKVDAIVQAILAVPEVALLDREMDADHNRSVLTFVGPPAAVADAAFRAVERAVAIIDLTQHH GAHPRIGAADVVPFIPIEGVTLEECVKLAERLGAEIWSKLKVPVYLYESAARRPDRTNLENIRRGQFEALLQEMGTVPAR DPDIGDPVCHPTAGAIVTGARKFLIAYNVNLNTPDLSIAKKIAKTIRFSNGGFRYVKSMGVMLASRNLAQVSINLTDFEQ TPMHLVFETVRREAERYGVSVIGSEIVGLIPKKAIELSAEYFLRYENFRPELVLENRIAEALATRSGLSEFLDALASPAA TPGGGSAAAAAAAMAAALGSMVTRLAKLDASSFEDDRRFFTEAADRDAEAFNLVMAAYKRPKAERAPFVEDALHGAAEVP LQVMERAHALQSRLHALEVPAKFGSDLAVAKSLVVAAFLGALENVKINLDSIQDAAFKDLVMTRMAVLK
Sequences:
>Translated_469_residues MPRQLVECVPNFSEGRDLAKVDAIVQAILAVPEVALLDREMDADHNRSVLTFVGPPAAVADAAFRAVERAVAIIDLTQHH GAHPRIGAADVVPFIPIEGVTLEECVKLAERLGAEIWSKLKVPVYLYESAARRPDRTNLENIRRGQFEALLQEMGTVPAR DPDIGDPVCHPTAGAIVTGARKFLIAYNVNLNTPDLSIAKKIAKTIRFSNGGFRYVKSMGVMLASRNLAQVSINLTDFEQ TPMHLVFETVRREAERYGVSVIGSEIVGLIPKKAIELSAEYFLRYENFRPELVLENRIAEALATRSGLSEFLDALASPAA TPGGGSAAAAAAAMAAALGSMVTRLAKLDASSFEDDRRFFTEAADRDAEAFNLVMAAYKRPKAERAPFVEDALHGAAEVP LQVMERAHALQSRLHALEVPAKFGSDLAVAKSLVVAAFLGALENVKINLDSIQDAAFKDLVMTRMAVLK >Mature_468_residues PRQLVECVPNFSEGRDLAKVDAIVQAILAVPEVALLDREMDADHNRSVLTFVGPPAAVADAAFRAVERAVAIIDLTQHHG AHPRIGAADVVPFIPIEGVTLEECVKLAERLGAEIWSKLKVPVYLYESAARRPDRTNLENIRRGQFEALLQEMGTVPARD PDIGDPVCHPTAGAIVTGARKFLIAYNVNLNTPDLSIAKKIAKTIRFSNGGFRYVKSMGVMLASRNLAQVSINLTDFEQT PMHLVFETVRREAERYGVSVIGSEIVGLIPKKAIELSAEYFLRYENFRPELVLENRIAEALATRSGLSEFLDALASPAAT PGGGSAAAAAAAMAAALGSMVTRLAKLDASSFEDDRRFFTEAADRDAEAFNLVMAAYKRPKAERAPFVEDALHGAAEVPL QVMERAHALQSRLHALEVPAKFGSDLAVAKSLVVAAFLGALENVKINLDSIQDAAFKDLVMTRMAVLK
Specific function: Unknown
COG id: COG3643
COG function: function code E; Glutamate formiminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI46255035, Length=525, Percent_Identity=36, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI11140815, Length=525, Percent_Identity=36, Blast_Score=266, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.2.5
Molecular weight: Translated: 50819; Mature: 50688
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQLVECVPNFSEGRDLAKVDAIVQAILAVPEVALLDREMDADHNRSVLTFVGPPAAVA CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCHHHH DAAFRAVERAVAIIDLTQHHGAHPRIGAADVVPFIPIEGVTLEECVKLAERLGAEIWSKL HHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KVPVYLYESAARRPDRTNLENIRRGQFEALLQEMGTVPARDPDIGDPVCHPTAGAIVTGA CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC RKFLIAYNVNLNTPDLSIAKKIAKTIRFSNGGFRYVKSMGVMLASRNLAQVSINLTDFEQ EEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC TPMHLVFETVRREAERYGVSVIGSEIVGLIPKKAIELSAEYFLRYENFRPELVLENRIAE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALATRSGLSEFLDALASPAATPGGGSAAAAAAAMAAALGSMVTRLAKLDASSFEDDRRFF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TEAADRDAEAFNLVMAAYKRPKAERAPFVEDALHGAAEVPLQVMERAHALQSRLHALEVP HHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCC AKFGSDLAVAKSLVVAAFLGALENVKINLDSIQDAAFKDLVMTRMAVLK HHHCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRQLVECVPNFSEGRDLAKVDAIVQAILAVPEVALLDREMDADHNRSVLTFVGPPAAVA CHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCHHHH DAAFRAVERAVAIIDLTQHHGAHPRIGAADVVPFIPIEGVTLEECVKLAERLGAEIWSKL HHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KVPVYLYESAARRPDRTNLENIRRGQFEALLQEMGTVPARDPDIGDPVCHPTAGAIVTGA CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC RKFLIAYNVNLNTPDLSIAKKIAKTIRFSNGGFRYVKSMGVMLASRNLAQVSINLTDFEQ EEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC TPMHLVFETVRREAERYGVSVIGSEIVGLIPKKAIELSAEYFLRYENFRPELVLENRIAE CHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALATRSGLSEFLDALASPAATPGGGSAAAAAAAMAAALGSMVTRLAKLDASSFEDDRRFF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TEAADRDAEAFNLVMAAYKRPKAERAPFVEDALHGAAEVPLQVMERAHALQSRLHALEVP HHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCC AKFGSDLAVAKSLVVAAFLGALENVKINLDSIQDAAFKDLVMTRMAVLK HHHCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-formimidoyltetrahydrofolate; L-glutamate
Specific reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA