Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622349
Identifier: 116622349
GI number: 116622349
Start: 4106164
End: 4107921
Strand: Reverse
Name: 116622349
Synonym: Acid_3243
Alternate gene names: NA
Gene position: 4107921-4106164 (Counterclockwise)
Preceding gene: 116622351
Following gene: 116622347
Centisome position: 41.22
GC content: 63.59
Gene sequence:
>1758_bases ATGCGATCGCAAACGCTCGGGATACTCGCAATTCTCACCGCCTCGTGCACGGCAGGCTTCGGCGCGGCCAAGACTACGCA CCTCACTTTTCGCGGTACGGGGTCGATTCACTCCACCAAGGCGAGCGGGGCCGAAACGTCGTTTGAAACCAGGCAGGGGC CATCGGTGGATGCCGCGTTCAATAAACAGATAGCGGGCACGGTGTCGCCCGCCCGCGTGCCCGCGGACCATGTACCCAAA CCGGCCACGGCTTCCATCGGTGCCGCAGGCAGCGGATTCTCCGGCTTCCAGGGAATCTCGCACCTCGACCAGCGGCTGGC GGCCAACGGGAATCAGTTCAGCACGGAGCCGCCGGACCAGGCGCTGGCAATTGGAAACGGTCTGGTGCTGGAATCGGTGA ACCTCGCGATCGCGGTCTACAACACGGCGGGGACGCAACTCGGCATTACGTCGTTGAATGAGTTCTTCGGCCTGCCGGAT GCGATCGTTCGCGGAACGACGCCGGTATACGGACCGTTCCTGAGCGATCCGCGCGCGTATTTCGACGCGCCGACGAACCG GTGGTTCGTGACGATATTGGAGATCGACACCAATCCCGTGACCGGCGACCTGCTGGGCCACTCGTCGGTGATGATTGCGG TCAGCCAGACCCCCAGTCCGTTGGGGGCTTTCAATATCTATGCGCTCGATACCACCAATGTGAGCCATCCCGGTTGTCCG TGTTTCGGCGACCAGCCGTTGATCGGCGCCGACAAGTACGGCTTCTATGTCACGACCAACGAGTTCCCGATCACAGGTGA CGGCTTCAACGGCGCGCAGATTTACGCGGTCTCGAAGACAGCGCTCGAGAACTCACTGCCGGCAGTGGTGGTGGCGTTCG AGGGTCCGGCGCTGGCGGAAGGGATCTCCTATTCCGTGCAGCCCGCCACGACGCCTCCGGGAGGCAGTTTCGAGGGCCTC AACGGCGGCACCGAATACTTCATGAGCGCGCTCGATTTCAACAGCACGCTCGACAACCGGATCGCGGTTTGGGCTCTTAC CAACACACAATCGCTGAATAGCACGACTCCGTCCGTGCAGCTGCAGAACGTGATTGTGTCGAGCCAGGTGTACGGATTGC CGCCGGCCATGCAGCAGAAGCCGGGGCCCACGCCGCTGGCCGACCTACTCAAGGTCAAGGGCAACCCGCTGGGCGTGGTG ACCAACGAACATCTGGAGTTGATCGATGGCGATGACGACCGCATGCAGCAGGTGGTGTTCGCCGCGGGGTCGCTGTGGAC GTCGCTCGGGACGGTGGTGAAGCCGCCGAATGGTCCGGTGCGCGTGGGGGCGGCGTGGTTCATCGTCACGCCATCGTGGA GCGGCGGCACGCTGGGGGCGGCGATGACGAACCAGGGATATGTGGCGGCGAACCAGAACAATCTGGCATACCCGGCGATC GGCGTGAATTCACTCGGCAAGGGCGTGATGACGTTTACGCTGGCGGGCCCGGATTACTTTCCAAGCGCGGCTTTCGCGAC GCTGGATAAGGTGAACGGAGCAGGTTCGATTCAGATTGCGGCTCCCGGCGCCGGGCCCGATGATGGGTTCACGGGATACG GAGCATTCGGCGGGCGTGTCGGCCGATGGGGAGATTACGCCGCGGCGGTGGCGGACAGCGATGGCTCGATCTGGCTGGCC GTGGAATACATTCCGGGCGGTCCGCGTACGGTGCTGGCGAACTGGGGCACCTTCGTGGGCCGGGTGATGGTGCACTAG
Upstream 100 bases:
>100_bases GCGACGGCAAGCAGAAGTAGTCCGGCAAGTCGCATCGCGCTTAATTTATCACCTTGGCGCGACTGTGGTGAAGGCATAGA ATGGTTGGCTCGGAGACAAC
Downstream 100 bases:
>100_bases CAACCGCTGCCCCGAAACGGGCAAAGCTAAAGCATGCCCCACCACTGAACAGCATCGCCTTGGTGGCGTACGCTTTTAGC TTGCGCGCAGTCGAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRSQTLGILAILTASCTAGFGAAKTTHLTFRGTGSIHSTKASGAETSFETRQGPSVDAAFNKQIAGTVSPARVPADHVPK PATASIGAAGSGFSGFQGISHLDQRLAANGNQFSTEPPDQALAIGNGLVLESVNLAIAVYNTAGTQLGITSLNEFFGLPD AIVRGTTPVYGPFLSDPRAYFDAPTNRWFVTILEIDTNPVTGDLLGHSSVMIAVSQTPSPLGAFNIYALDTTNVSHPGCP CFGDQPLIGADKYGFYVTTNEFPITGDGFNGAQIYAVSKTALENSLPAVVVAFEGPALAEGISYSVQPATTPPGGSFEGL NGGTEYFMSALDFNSTLDNRIAVWALTNTQSLNSTTPSVQLQNVIVSSQVYGLPPAMQQKPGPTPLADLLKVKGNPLGVV TNEHLELIDGDDDRMQQVVFAAGSLWTSLGTVVKPPNGPVRVGAAWFIVTPSWSGGTLGAAMTNQGYVAANQNNLAYPAI GVNSLGKGVMTFTLAGPDYFPSAAFATLDKVNGAGSIQIAAPGAGPDDGFTGYGAFGGRVGRWGDYAAAVADSDGSIWLA VEYIPGGPRTVLANWGTFVGRVMVH
Sequences:
>Translated_585_residues MRSQTLGILAILTASCTAGFGAAKTTHLTFRGTGSIHSTKASGAETSFETRQGPSVDAAFNKQIAGTVSPARVPADHVPK PATASIGAAGSGFSGFQGISHLDQRLAANGNQFSTEPPDQALAIGNGLVLESVNLAIAVYNTAGTQLGITSLNEFFGLPD AIVRGTTPVYGPFLSDPRAYFDAPTNRWFVTILEIDTNPVTGDLLGHSSVMIAVSQTPSPLGAFNIYALDTTNVSHPGCP CFGDQPLIGADKYGFYVTTNEFPITGDGFNGAQIYAVSKTALENSLPAVVVAFEGPALAEGISYSVQPATTPPGGSFEGL NGGTEYFMSALDFNSTLDNRIAVWALTNTQSLNSTTPSVQLQNVIVSSQVYGLPPAMQQKPGPTPLADLLKVKGNPLGVV TNEHLELIDGDDDRMQQVVFAAGSLWTSLGTVVKPPNGPVRVGAAWFIVTPSWSGGTLGAAMTNQGYVAANQNNLAYPAI GVNSLGKGVMTFTLAGPDYFPSAAFATLDKVNGAGSIQIAAPGAGPDDGFTGYGAFGGRVGRWGDYAAAVADSDGSIWLA VEYIPGGPRTVLANWGTFVGRVMVH >Mature_585_residues MRSQTLGILAILTASCTAGFGAAKTTHLTFRGTGSIHSTKASGAETSFETRQGPSVDAAFNKQIAGTVSPARVPADHVPK PATASIGAAGSGFSGFQGISHLDQRLAANGNQFSTEPPDQALAIGNGLVLESVNLAIAVYNTAGTQLGITSLNEFFGLPD AIVRGTTPVYGPFLSDPRAYFDAPTNRWFVTILEIDTNPVTGDLLGHSSVMIAVSQTPSPLGAFNIYALDTTNVSHPGCP CFGDQPLIGADKYGFYVTTNEFPITGDGFNGAQIYAVSKTALENSLPAVVVAFEGPALAEGISYSVQPATTPPGGSFEGL NGGTEYFMSALDFNSTLDNRIAVWALTNTQSLNSTTPSVQLQNVIVSSQVYGLPPAMQQKPGPTPLADLLKVKGNPLGVV TNEHLELIDGDDDRMQQVVFAAGSLWTSLGTVVKPPNGPVRVGAAWFIVTPSWSGGTLGAAMTNQGYVAANQNNLAYPAI GVNSLGKGVMTFTLAGPDYFPSAAFATLDKVNGAGSIQIAAPGAGPDDGFTGYGAFGGRVGRWGDYAAAVADSDGSIWLA VEYIPGGPRTVLANWGTFVGRVMVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60521; Mature: 60521
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSQTLGILAILTASCTAGFGAAKTTHLTFRGTGSIHSTKASGAETSFETRQGPSVDAAF CCCCHHEEEEEEHHHHCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCHHH NKQIAGTVSPARVPADHVPKPATASIGAAGSGFSGFQGISHLDQRLAANGNQFSTEPPDQ CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC ALAIGNGLVLESVNLAIAVYNTAGTQLGITSLNEFFGLPDAIVRGTTPVYGPFLSDPRAY EEEECCCEEEEECEEEEEEEECCCCEEEHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHH FDAPTNRWFVTILEIDTNPVTGDLLGHSSVMIAVSQTPSPLGAFNIYALDTTNVSHPGCP HCCCCCCEEEEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCC CFGDQPLIGADKYGFYVTTNEFPITGDGFNGAQIYAVSKTALENSLPAVVVAFEGPALAE CCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEEEHHHHCCCCCEEEEEECCCHHHC GISYSVQPATTPPGGSFEGLNGGTEYFMSALDFNSTLDNRIAVWALTNTQSLNSTTPSVQ CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEE LQNVIVSSQVYGLPPAMQQKPGPTPLADLLKVKGNPLGVVTNEHLELIDGDDDRMQQVVF EEEEEEECEECCCCCHHHCCCCCCCHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHHH AAGSLWTSLGTVVKPPNGPVRVGAAWFIVTPSWSGGTLGAAMTNQGYVAANQNNLAYPAI HHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCEEECCC GVNSLGKGVMTFTLAGPDYFPSAAFATLDKVNGAGSIQIAAPGAGPDDGFTGYGAFGGRV CHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC GRWGDYAAAVADSDGSIWLAVEYIPGGPRTVLANWGTFVGRVMVH CCCCCEEEEEECCCCCEEEEEEEECCCCEEEEECCCCHHEEEECC >Mature Secondary Structure MRSQTLGILAILTASCTAGFGAAKTTHLTFRGTGSIHSTKASGAETSFETRQGPSVDAAF CCCCHHEEEEEEHHHHCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCHHH NKQIAGTVSPARVPADHVPKPATASIGAAGSGFSGFQGISHLDQRLAANGNQFSTEPPDQ CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC ALAIGNGLVLESVNLAIAVYNTAGTQLGITSLNEFFGLPDAIVRGTTPVYGPFLSDPRAY EEEECCCEEEEECEEEEEEEECCCCEEEHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHH FDAPTNRWFVTILEIDTNPVTGDLLGHSSVMIAVSQTPSPLGAFNIYALDTTNVSHPGCP HCCCCCCEEEEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCC CFGDQPLIGADKYGFYVTTNEFPITGDGFNGAQIYAVSKTALENSLPAVVVAFEGPALAE CCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEEEHHHHCCCCCEEEEEECCCHHHC GISYSVQPATTPPGGSFEGLNGGTEYFMSALDFNSTLDNRIAVWALTNTQSLNSTTPSVQ CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEE LQNVIVSSQVYGLPPAMQQKPGPTPLADLLKVKGNPLGVVTNEHLELIDGDDDRMQQVVF EEEEEEECEECCCCCHHHCCCCCCCHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHHH AAGSLWTSLGTVVKPPNGPVRVGAAWFIVTPSWSGGTLGAAMTNQGYVAANQNNLAYPAI HHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCEEECCC GVNSLGKGVMTFTLAGPDYFPSAAFATLDKVNGAGSIQIAAPGAGPDDGFTGYGAFGGRV CHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC GRWGDYAAAVADSDGSIWLAVEYIPGGPRTVLANWGTFVGRVMVH CCCCCEEEEEECCCCCEEEEEEEECCCCEEEEECCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA