Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622295
Identifier: 116622295
GI number: 116622295
Start: 4037862
End: 4039517
Strand: Direct
Name: 116622295
Synonym: Acid_3189
Alternate gene names: NA
Gene position: 4037862-4039517 (Clockwise)
Preceding gene: 116622291
Following gene: 116622296
Centisome position: 40.52
GC content: 64.25
Gene sequence:
>1656_bases ATGGGAAACTCGAAGCTGTCTAGCTCGGCGCACTCGCCGGTTGGCGCCGGAATCTTCGCCTGCGCGCTGGCCCTTATTTG CGGAGCGGCGGTGTTCACCGGGTTGGCGCCGCTGCGCGTGTTCGAACACGACATCTTCTTCCTGCTCGATAACGCGTACC GGGTGCTCCAGGGGCAGGTGCCGCATCGCGACTTCTTCTCCGCGTGGGGTCCGGTCATCCATCTGATCGGCGCCGGGGGG CTTTTCCTGGCGCGAATGAAGCCCGACGGGATCGCTTACGCCAACGCGATCTGCGCCGCGCTGATCGGCATATGGGCATA CCGGGTGGGGCGGGTCCGCTTGGGTTCCGCGGCGGCCTGCTGTATGGGAATCTATACCGTGCTGCTGATCGCAACGCCAT CCTCGCTGGGGTACGGCGCGCTGATGTTCAGCCATGCGATGGTTTATAACCGGTACGGGTTCGCCCTGCTCGGGATCATC CTGGTGGAATGCGGCACGCACTTTTTTGGGACGGAAGCTACGCATCGTGGGGCGATCTCGTCCGGCGCGGCCTTCGCCAT TCTCGGCTTCCTGAAGATCAGCTATGCGCTCGCCGCGGCGCCGATCCTGCTGCTTGGATATGCGTTTGGTTCCGGGCGCG CGCGGCGCCTCATGATTTTCTGTGGAACCGCGGCGATCGTATCCTTTCCATTTCTCGGTTATCTGCGATTCGATGTGGGC GACATGCTCCGCGATCTCGCAATGGCTGGGGCGGCACGCAGGCTGTCATGGCATCCGACAGAGCTTTTCGCAGATGGATT CGGCCTGATTGGCGAGACCATCCCGCTGCTGCTGTTACTGGCTACGCTGGCGCTGGCGCGAAGATCGGCAGCCGCGGGGG AATCGAAGTGGCGGGTTCGGGAGTTGGTGCTCGTAGGCGTGACGACAGCGGTCGGCGCGCTTCTGCTGACCACCAATCAC CAGCCGGGCGGATTGCCGTTGAATGCGTTTGCGGCGCTGGTGCTGGCGGACCCTTACCTTGTTCGCCGGCAGTCCGGGGA TGAGGCTGACGGGCCGCTGGGCTTCGCGATGGCGTTCCTGATGGTGGTCTGTGTGCTTCGGGTGGCAGCGCCGGACGCGG TATCGCTGGGAGCCGCTGCCTGGGAGCGCTATCGCGGGGACGCGCCTGCGTTGAGGTTGGCTTCCGAGCGCGGGGCGACG ATCGACTTCGAACCGGTGCGATGCCTGACGAGCAGCGAGACCGGCGGGCCGGGATACGTGGCTGCGCTGAATGACGGCAT CGAGTTGCTGCGACGGCATACAAGCGCCGGCGACGGGGTGTTGGCGATCGACATGATGAATCCGTTCAACTACCTTTTGG GCCGCCGGTCGCCAGTGGGCGGTGTCTCGGCGGGAGCCTATAACTACGTTCTCAGCGATGCGGCCCATCCGACGGACGAG CGCTTTTTCGGCAATGCGCGATGTGTGCTGGTGCGGAAATACGGCAGGGAGGTCGGGGATTTCGCGCTGGAGCAGTTCAA CATCGACGGATTATTCCGGATCTACCGGCCGGCGCTGGAAGCGCGATTCCGGCTGGTTGAGGAGACGCGGCACTGGCGTT TGTATGTACTGTGCGGGGGCGTCGGCCGTCTTCAGGCGGGATTGCCTGCCCGCTAA
Upstream 100 bases:
>100_bases GGAGAAGATCAACGGATTAACTAAGGCAAATGGCGGAAGACCACGAAAGAGAATCTGGCCGGAGGGCGCCGGGTTCCCGA TACTGGTCGTGAACGGCCGC
Downstream 100 bases:
>100_bases CGGCTAGCATAGAGGGGAATGCCTATAGCCGCTGCCCGCATCGCCGCGTTTGACATCCTTCAGCTGGTAGAGAGCGGCGG GTACGCGTCGGATTTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MGNSKLSSSAHSPVGAGIFACALALICGAAVFTGLAPLRVFEHDIFFLLDNAYRVLQGQVPHRDFFSAWGPVIHLIGAGG LFLARMKPDGIAYANAICAALIGIWAYRVGRVRLGSAAACCMGIYTVLLIATPSSLGYGALMFSHAMVYNRYGFALLGII LVECGTHFFGTEATHRGAISSGAAFAILGFLKISYALAAAPILLLGYAFGSGRARRLMIFCGTAAIVSFPFLGYLRFDVG DMLRDLAMAGAARRLSWHPTELFADGFGLIGETIPLLLLLATLALARRSAAAGESKWRVRELVLVGVTTAVGALLLTTNH QPGGLPLNAFAALVLADPYLVRRQSGDEADGPLGFAMAFLMVVCVLRVAAPDAVSLGAAAWERYRGDAPALRLASERGAT IDFEPVRCLTSSETGGPGYVAALNDGIELLRRHTSAGDGVLAIDMMNPFNYLLGRRSPVGGVSAGAYNYVLSDAAHPTDE RFFGNARCVLVRKYGREVGDFALEQFNIDGLFRIYRPALEARFRLVEETRHWRLYVLCGGVGRLQAGLPAR
Sequences:
>Translated_551_residues MGNSKLSSSAHSPVGAGIFACALALICGAAVFTGLAPLRVFEHDIFFLLDNAYRVLQGQVPHRDFFSAWGPVIHLIGAGG LFLARMKPDGIAYANAICAALIGIWAYRVGRVRLGSAAACCMGIYTVLLIATPSSLGYGALMFSHAMVYNRYGFALLGII LVECGTHFFGTEATHRGAISSGAAFAILGFLKISYALAAAPILLLGYAFGSGRARRLMIFCGTAAIVSFPFLGYLRFDVG DMLRDLAMAGAARRLSWHPTELFADGFGLIGETIPLLLLLATLALARRSAAAGESKWRVRELVLVGVTTAVGALLLTTNH QPGGLPLNAFAALVLADPYLVRRQSGDEADGPLGFAMAFLMVVCVLRVAAPDAVSLGAAAWERYRGDAPALRLASERGAT IDFEPVRCLTSSETGGPGYVAALNDGIELLRRHTSAGDGVLAIDMMNPFNYLLGRRSPVGGVSAGAYNYVLSDAAHPTDE RFFGNARCVLVRKYGREVGDFALEQFNIDGLFRIYRPALEARFRLVEETRHWRLYVLCGGVGRLQAGLPAR >Mature_550_residues GNSKLSSSAHSPVGAGIFACALALICGAAVFTGLAPLRVFEHDIFFLLDNAYRVLQGQVPHRDFFSAWGPVIHLIGAGGL FLARMKPDGIAYANAICAALIGIWAYRVGRVRLGSAAACCMGIYTVLLIATPSSLGYGALMFSHAMVYNRYGFALLGIIL VECGTHFFGTEATHRGAISSGAAFAILGFLKISYALAAAPILLLGYAFGSGRARRLMIFCGTAAIVSFPFLGYLRFDVGD MLRDLAMAGAARRLSWHPTELFADGFGLIGETIPLLLLLATLALARRSAAAGESKWRVRELVLVGVTTAVGALLLTTNHQ PGGLPLNAFAALVLADPYLVRRQSGDEADGPLGFAMAFLMVVCVLRVAAPDAVSLGAAAWERYRGDAPALRLASERGATI DFEPVRCLTSSETGGPGYVAALNDGIELLRRHTSAGDGVLAIDMMNPFNYLLGRRSPVGGVSAGAYNYVLSDAAHPTDER FFGNARCVLVRKYGREVGDFALEQFNIDGLFRIYRPALEARFRLVEETRHWRLYVLCGGVGRLQAGLPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58835; Mature: 58704
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSKLSSSAHSPVGAGIFACALALICGAAVFTGLAPLRVFEHDIFFLLDNAYRVLQGQV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC PHRDFFSAWGPVIHLIGAGGLFLARMKPDGIAYANAICAALIGIWAYRVGRVRLGSAAAC CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHH CMGIYTVLLIATPSSLGYGALMFSHAMVYNRYGFALLGIILVECGTHFFGTEATHRGAIS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGAAFAILGFLKISYALAAAPILLLGYAFGSGRARRLMIFCGTAAIVSFPFLGYLRFDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHH DMLRDLAMAGAARRLSWHPTELFADGFGLIGETIPLLLLLATLALARRSAAAGESKWRVR HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELVLVGVTTAVGALLLTTNHQPGGLPLNAFAALVLADPYLVRRQSGDEADGPLGFAMAFL HHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCHHHHHHHH MVVCVLRVAAPDAVSLGAAAWERYRGDAPALRLASERGATIDFEPVRCLTSSETGGPGYV HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCHHEEECCCCCCCEEE AALNDGIELLRRHTSAGDGVLAIDMMNPFNYLLGRRSPVGGVSAGAYNYVLSDAAHPTDE EEEHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCH RFFGNARCVLVRKYGREVGDFALEQFNIDGLFRIYRPALEARFRLVEETRHWRLYVLCGG HHCCCCEEEEEEHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC VGRLQAGLPAR CHHHCCCCCCC >Mature Secondary Structure GNSKLSSSAHSPVGAGIFACALALICGAAVFTGLAPLRVFEHDIFFLLDNAYRVLQGQV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC PHRDFFSAWGPVIHLIGAGGLFLARMKPDGIAYANAICAALIGIWAYRVGRVRLGSAAAC CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHH CMGIYTVLLIATPSSLGYGALMFSHAMVYNRYGFALLGIILVECGTHFFGTEATHRGAIS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGAAFAILGFLKISYALAAAPILLLGYAFGSGRARRLMIFCGTAAIVSFPFLGYLRFDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHH DMLRDLAMAGAARRLSWHPTELFADGFGLIGETIPLLLLLATLALARRSAAAGESKWRVR HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELVLVGVTTAVGALLLTTNHQPGGLPLNAFAALVLADPYLVRRQSGDEADGPLGFAMAFL HHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCHHHHHHHH MVVCVLRVAAPDAVSLGAAAWERYRGDAPALRLASERGATIDFEPVRCLTSSETGGPGYV HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCHHEEECCCCCCCEEE AALNDGIELLRRHTSAGDGVLAIDMMNPFNYLLGRRSPVGGVSAGAYNYVLSDAAHPTDE EEEHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCH RFFGNARCVLVRKYGREVGDFALEQFNIDGLFRIYRPALEARFRLVEETRHWRLYVLCGG HHCCCCEEEEEEHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC VGRLQAGLPAR CHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA