Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116622206

Identifier: 116622206

GI number: 116622206

Start: 3923070

End: 3923546

Strand: Direct

Name: 116622206

Synonym: Acid_3098

Alternate gene names: NA

Gene position: 3923070-3923546 (Clockwise)

Preceding gene: 116622205

Following gene: 116622207

Centisome position: 39.37

GC content: 62.47

Gene sequence:

>477_bases
ATGCGCTGCCGTAGTGGGGCATTGCCGGCGGCGGCGGGCTTCGCGATCGGGGTGATCGCGATGGCCGCTGCCGCGCAATC
GAACGAGCAGCTTCTGCCGGCGGGGCCGCAGCGGGAGAAGATGGTGAAGTTGTGCGTGGGCTGTCATGAGATCGACCTCG
TGGTTGCGCGGCGGCACACACGCGAGGAATGGGACGGTGTGGTCGAGGACATGATCGCGCGGGGCAGCAAGGGGACGGAA
GAAGAGCTCTCGATGGTTGCCGAGTACCTGAGTAAGTATCTCGGTAAAGTGAGCGTCAATGCGGCAACGGCAGCGGAACT
GCAGGAGGGGCTCAAGATATCGGACAAGGATGCACGGCTGATTGTGGAGTGGCGCGAACAGCACGGCAAGTTCAAGAACT
TCGAGGAAGTGCGCAAAGTGCCGGGCCTGGATGCCGCCAAGATCGGCGACAAGCGCGGCTGGATGTCATTTGAGTGA

Upstream 100 bases:

>100_bases
ATGACCTTCCAGGGGAAGAACGGGAAGCAGTATGTTGTGATCACAGCGACGGGGGGCGGCTTCCTGGGCGACAAGAGCCG
GGCGGACACGGTGATTGCGT

Downstream 100 bases:

>100_bases
AATGGGGGTATTGAGATGAAGACCGCGGATTTGATCGTTCGCACGCATATCAGTGAGGGTGAAAAGCGGATTGCGGCTTA
CCAACTGGTGGATTACCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRCRSGALPAAAGFAIGVIAMAAAAQSNEQLLPAGPQREKMVKLCVGCHEIDLVVARRHTREEWDGVVEDMIARGSKGTE
EELSMVAEYLSKYLGKVSVNAATAAELQEGLKISDKDARLIVEWREQHGKFKNFEEVRKVPGLDAAKIGDKRGWMSFE

Sequences:

>Translated_158_residues
MRCRSGALPAAAGFAIGVIAMAAAAQSNEQLLPAGPQREKMVKLCVGCHEIDLVVARRHTREEWDGVVEDMIARGSKGTE
EELSMVAEYLSKYLGKVSVNAATAAELQEGLKISDKDARLIVEWREQHGKFKNFEEVRKVPGLDAAKIGDKRGWMSFE
>Mature_158_residues
MRCRSGALPAAAGFAIGVIAMAAAAQSNEQLLPAGPQREKMVKLCVGCHEIDLVVARRHTREEWDGVVEDMIARGSKGTE
EELSMVAEYLSKYLGKVSVNAATAAELQEGLKISDKDARLIVEWREQHGKFKNFEEVRKVPGLDAAKIGDKRGWMSFE

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17358; Mature: 17358

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCRSGALPAAAGFAIGVIAMAAAAQSNEQLLPAGPQREKMVKLCVGCHEIDLVVARRHT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
REEWDGVVEDMIARGSKGTEEELSMVAEYLSKYLGKVSVNAATAAELQEGLKISDKDARL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH
IVEWREQHGKFKNFEEVRKVPGLDAAKIGDKRGWMSFE
HHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MRCRSGALPAAAGFAIGVIAMAAAAQSNEQLLPAGPQREKMVKLCVGCHEIDLVVARRHT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
REEWDGVVEDMIARGSKGTEEELSMVAEYLSKYLGKVSVNAATAAELQEGLKISDKDARL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH
IVEWREQHGKFKNFEEVRKVPGLDAAKIGDKRGWMSFE
HHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA