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The map label for this gene is 116622105

Identifier: 116622105

GI number: 116622105

Start: 3784600

End: 3786504

Strand: Direct

Name: 116622105

Synonym: Acid_2992

Alternate gene names: NA

Gene position: 3784600-3786504 (Clockwise)

Preceding gene: 116622104

Following gene: 116622106

Centisome position: 37.98

GC content: 59.53

Gene sequence:

>1905_bases
ATGAACTATCGTTTCCCAATCATCTCCTCGGCCTTGCTCCTTTCTTTTCTGGGAACGCCGATCATATCCGCGCAGGCTCC
GGCCGCGCTCACGGTCGAGGTAGACAAAACGAAGTCTTCCGTGAGCCCGACCCTCTACGGGCTAATGACCGAGGAGATCA
ATTACTCTTACGACGGTGGGTTGTACGCCGAGCTGATTCGCAACCGCACTTTTCGCTCCGACTGGAGCGGCATCCTGAAC
TGGTACGTGATTGAAAAGGGCAATGCCTCGGCGAAGCTTTCGGTGGACGAGAAGACCGGCCCCTCGAGTGCCCTCGGCAC
GAGCGCGAAGCTCGAAGTCACCCGCGCCGACGCCGACAGCCGCGCCGGTCTGCTCAACGAAGGCTACTGGGGCCTCGCCG
TGCGTCCCAACACGCGCTACACCGGATCGTTCTATGCGAAGACGGATTTGGCAACCGCCCTGCCAGTGCGTATTGCGCTG
GTAGCGGACCAATCCGGGCAGGTCCTGGCAAGCGCCAATGCCTCGATCGGCGGCGCGGATTGGAAGCAGTACCGATTTGA
GATGCGGTCCGGAAGCGCCGCGACCGGATCGGAAAACCACCTGGAGATAACCGTCGATCGGCCTGCAACCGTATGGCTGC
AACTCGTCTCGCTGTTTCCCCCCACGTACCACACTCGCGCCAACGGCAATCGCACCGACATCATGGAGAAATTGGCCGCG
ATGCGTCCCTCCTTTTTGCGATTCCCTGGCGGCAATTATCTCGAAGGAAATCGGATCGAGACCCGTTTCAACTGGAAGCG
AATGATCGGCCCGCTGGTCGATCGTCCAACGCACCCGACTACGTGGAGCTACCATTCGAGCGACGGAATGGGGTTGCTGG
AGTTTCTCGAATGGTGCGAGGACCTGCACATGGAGCCGGTCCTCGGAATCTATGCCGGCTACTCGCTGGGCGGGCAGGTC
GTGAAGCCGGGTCCCGACCTCGAGCCCTACGTACAGGAGGGGCTGGAAGAGATCGAGTATGTCACCGGGGGAACGGATAC
CAAATGGGGTGCGCTTCGTGCGCGCGACGGCCATCCAGCGCCGTTCACTCTCCGGTATGTTGAAATCGGCAACGAAGACA
ACTTCGATCGCGCCAAGACTTACGATGGCCGCTACGCTCAGTTCTACAAAGCGATCAAGGCGAAGCACCCCAAGTTGCAG
GTGATCGCCACCATCCCGGTGAACGGACTGACACCCGACGTGGTGGATGACCATTACTACAAGCGCGAGCAAGGCATGTT
TGCCGAGGCGCGCCATTATGACAACGTGGACCGGAACGGCCCCAAGATCTTCGTCGGCGAATGGGCGACTCGCGAGGGCG
GCCCCACGCCGAATTTTGGGGCGGCGCTCGGCGATGCCGCATTCCTGACAGGACTCGAGCGCAACAGCGACGTCGTCATT
ATGGCGGCATACGCGCCTCTGTTCGTCAATGTCAACCCCGGCGGCATGCAATGGACCTCCGACCTGATCGGCTACGATGC
TCTTAGCAGTTACGGTTCGCCGAGTTACTACGCCCAAGTCATGTTTGCATCATGCCTGGGCGACCACACCGTGAGTTCGT
CGCTCGCGGGCGCTGGAGAGCGGTTCTTTTATTCGGTAACCGCTTCTCAGAATAAACTTTGCGTGAAACTCGTCAACGCG
AGTTCCACCGAACAGACGCTCAGCCTCACAATGCAAGGACTAGGCGCTTCCAGCCATACGGCGCGAGTCCAGACGCTGAA
AGCGATTACGACCTGGGCGACCAACACCATCGCACAGCCCGAGCGCATCGTTCCGGTGAAGTCCACCGCGTCCATCAAGG
ACGAGCACATACAGCACGTGATGCCGGGATATTCGATTCAGGTTATCGAGCTTGATCTCAAATAA

Upstream 100 bases:

>100_bases
GCCGAACTGGCAGGTCTACCTTTCGAAGTACGCTCCGCTACTATTTCGCGACTGAGCTGCGATGCGACATTCGCTCTAAT
CCGCCTTCACAAAGGACAGC

Downstream 100 bases:

>100_bases
GCACATGAGCAGGGTCATGTTTCGCCTGGCGGTGTTGCTTGCCGCGTACACCGTTGCGCCGGGTGCCGACTCGCGTGCAG
TCCACCGGTCCTGGGCGGCC

Product: alpha-N-arabinofuranosidase

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase I; Alpha-N-AFase I; Arabinosidase I [H]

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MNYRFPIISSALLLSFLGTPIISAQAPAALTVEVDKTKSSVSPTLYGLMTEEINYSYDGGLYAELIRNRTFRSDWSGILN
WYVIEKGNASAKLSVDEKTGPSSALGTSAKLEVTRADADSRAGLLNEGYWGLAVRPNTRYTGSFYAKTDLATALPVRIAL
VADQSGQVLASANASIGGADWKQYRFEMRSGSAATGSENHLEITVDRPATVWLQLVSLFPPTYHTRANGNRTDIMEKLAA
MRPSFLRFPGGNYLEGNRIETRFNWKRMIGPLVDRPTHPTTWSYHSSDGMGLLEFLEWCEDLHMEPVLGIYAGYSLGGQV
VKPGPDLEPYVQEGLEEIEYVTGGTDTKWGALRARDGHPAPFTLRYVEIGNEDNFDRAKTYDGRYAQFYKAIKAKHPKLQ
VIATIPVNGLTPDVVDDHYYKREQGMFAEARHYDNVDRNGPKIFVGEWATREGGPTPNFGAALGDAAFLTGLERNSDVVI
MAAYAPLFVNVNPGGMQWTSDLIGYDALSSYGSPSYYAQVMFASCLGDHTVSSSLAGAGERFFYSVTASQNKLCVKLVNA
SSTEQTLSLTMQGLGASSHTARVQTLKAITTWATNTIAQPERIVPVKSTASIKDEHIQHVMPGYSIQVIELDLK

Sequences:

>Translated_634_residues
MNYRFPIISSALLLSFLGTPIISAQAPAALTVEVDKTKSSVSPTLYGLMTEEINYSYDGGLYAELIRNRTFRSDWSGILN
WYVIEKGNASAKLSVDEKTGPSSALGTSAKLEVTRADADSRAGLLNEGYWGLAVRPNTRYTGSFYAKTDLATALPVRIAL
VADQSGQVLASANASIGGADWKQYRFEMRSGSAATGSENHLEITVDRPATVWLQLVSLFPPTYHTRANGNRTDIMEKLAA
MRPSFLRFPGGNYLEGNRIETRFNWKRMIGPLVDRPTHPTTWSYHSSDGMGLLEFLEWCEDLHMEPVLGIYAGYSLGGQV
VKPGPDLEPYVQEGLEEIEYVTGGTDTKWGALRARDGHPAPFTLRYVEIGNEDNFDRAKTYDGRYAQFYKAIKAKHPKLQ
VIATIPVNGLTPDVVDDHYYKREQGMFAEARHYDNVDRNGPKIFVGEWATREGGPTPNFGAALGDAAFLTGLERNSDVVI
MAAYAPLFVNVNPGGMQWTSDLIGYDALSSYGSPSYYAQVMFASCLGDHTVSSSLAGAGERFFYSVTASQNKLCVKLVNA
SSTEQTLSLTMQGLGASSHTARVQTLKAITTWATNTIAQPERIVPVKSTASIKDEHIQHVMPGYSIQVIELDLK
>Mature_634_residues
MNYRFPIISSALLLSFLGTPIISAQAPAALTVEVDKTKSSVSPTLYGLMTEEINYSYDGGLYAELIRNRTFRSDWSGILN
WYVIEKGNASAKLSVDEKTGPSSALGTSAKLEVTRADADSRAGLLNEGYWGLAVRPNTRYTGSFYAKTDLATALPVRIAL
VADQSGQVLASANASIGGADWKQYRFEMRSGSAATGSENHLEITVDRPATVWLQLVSLFPPTYHTRANGNRTDIMEKLAA
MRPSFLRFPGGNYLEGNRIETRFNWKRMIGPLVDRPTHPTTWSYHSSDGMGLLEFLEWCEDLHMEPVLGIYAGYSLGGQV
VKPGPDLEPYVQEGLEEIEYVTGGTDTKWGALRARDGHPAPFTLRYVEIGNEDNFDRAKTYDGRYAQFYKAIKAKHPKLQ
VIATIPVNGLTPDVVDDHYYKREQGMFAEARHYDNVDRNGPKIFVGEWATREGGPTPNFGAALGDAAFLTGLERNSDVVI
MAAYAPLFVNVNPGGMQWTSDLIGYDALSSYGSPSYYAQVMFASCLGDHTVSSSLAGAGERFFYSVTASQNKLCVKLVNA
SSTEQTLSLTMQGLGASSHTARVQTLKAITTWATNTIAQPERIVPVKSTASIKDEHIQHVMPGYSIQVIELDLK

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM-cenC (cenC-type cellulose-binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR003305
- InterPro:   IPR008985
- InterPro:   IPR008979
- InterPro:   IPR017853 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C; PF02018 CBM_4_9 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 69586; Mature: 69586

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRFPIISSALLLSFLGTPIISAQAPAALTVEVDKTKSSVSPTLYGLMTEEINYSYDGG
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHCCCCCCCC
LYAELIRNRTFRSDWSGILNWYVIEKGNASAKLSVDEKTGPSSALGTSAKLEVTRADADS
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC
RAGLLNEGYWGLAVRPNTRYTGSFYAKTDLATALPVRIALVADQSGQVLASANASIGGAD
CCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCC
WKQYRFEMRSGSAATGSENHLEITVDRPATVWLQLVSLFPPTYHTRANGNRTDIMEKLAA
HHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
MRPSFLRFPGGNYLEGNRIETRFNWKRMIGPLVDRPTHPTTWSYHSSDGMGLLEFLEWCE
CCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH
DLHMEPVLGIYAGYSLGGQVVKPGPDLEPYVQEGLEEIEYVTGGTDTKWGALRARDGHPA
HCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC
PFTLRYVEIGNEDNFDRAKTYDGRYAQFYKAIKAKHPKLQVIATIPVNGLTPDVVDDHYY
CEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCHHH
KREQGMFAEARHYDNVDRNGPKIFVGEWATREGGPTPNFGAALGDAAFLTGLERNSDVVI
HHHCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCEEE
MAAYAPLFVNVNPGGMQWTSDLIGYDALSSYGSPSYYAQVMFASCLGDHTVSSSLAGAGE
EEEECEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCC
RFFYSVTASQNKLCVKLVNASSTEQTLSLTMQGLGASSHTARVQTLKAITTWATNTIAQP
EEEEEEECCCCCEEEEEECCCCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ERIVPVKSTASIKDEHIQHVMPGYSIQVIELDLK
CCEEECCCCCCCCHHHHHHHCCCCEEEEEEEECC
>Mature Secondary Structure
MNYRFPIISSALLLSFLGTPIISAQAPAALTVEVDKTKSSVSPTLYGLMTEEINYSYDGG
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHCCCCCCCC
LYAELIRNRTFRSDWSGILNWYVIEKGNASAKLSVDEKTGPSSALGTSAKLEVTRADADS
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC
RAGLLNEGYWGLAVRPNTRYTGSFYAKTDLATALPVRIALVADQSGQVLASANASIGGAD
CCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCC
WKQYRFEMRSGSAATGSENHLEITVDRPATVWLQLVSLFPPTYHTRANGNRTDIMEKLAA
HHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
MRPSFLRFPGGNYLEGNRIETRFNWKRMIGPLVDRPTHPTTWSYHSSDGMGLLEFLEWCE
CCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH
DLHMEPVLGIYAGYSLGGQVVKPGPDLEPYVQEGLEEIEYVTGGTDTKWGALRARDGHPA
HCCCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC
PFTLRYVEIGNEDNFDRAKTYDGRYAQFYKAIKAKHPKLQVIATIPVNGLTPDVVDDHYY
CEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCHHH
KREQGMFAEARHYDNVDRNGPKIFVGEWATREGGPTPNFGAALGDAAFLTGLERNSDVVI
HHHCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCEEE
MAAYAPLFVNVNPGGMQWTSDLIGYDALSSYGSPSYYAQVMFASCLGDHTVSSSLAGAGE
EEEECEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCC
RFFYSVTASQNKLCVKLVNASSTEQTLSLTMQGLGASSHTARVQTLKAITTWATNTIAQP
EEEEEEECCCCCEEEEEECCCCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ERIVPVKSTASIKDEHIQHVMPGYSIQVIELDLK
CCEEECCCCCCCCHHHHHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]