Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622103
Identifier: 116622103
GI number: 116622103
Start: 3781469
End: 3783409
Strand: Direct
Name: 116622103
Synonym: Acid_2990
Alternate gene names: NA
Gene position: 3781469-3783409 (Clockwise)
Preceding gene: 116622102
Following gene: 116622104
Centisome position: 37.95
GC content: 62.08
Gene sequence:
>1941_bases ATGAGGATTCATCGAAAAGCAATTGCCGCCGTTTGGGCTCTCGCCGCCGTTGCCACGGCGCAGGTCGCTCCCGTCACGCT CACGGCTCCTGCTTCACCCCAACAGGCTCCGAATTCGGATGGCTTCATCCAGCGTTGGCTGCTGCTGGAGCCGATCGAGA CCAACGGCCTCACGGAGAGCGCGGTTCAGGCAGCAGTGAAAAGGGAGTATTTCCCCGACCAGCTCACCGTCGTACCGCGC GACGGCGACAAGGTGATGGCAGGCGCGTCACAGCTCACCTGGCACGCCGTCGATACCAGCAATTACAACGTCAACCTCTA TCACTTCGCTCACGCGCTGGGTAAGCCGACGTCGAACGTACTGTTTTGGGCCGTCACCATTGTCAACCTGCCTCGCGAGA TGTCCGGCGTGCGCTTGGCGATCGGTTCGAATGCCGCCTCCGTATGGTGGGTGAACGGGCAGGAGGTCATCGGGATTTAT GGCGACCGGCAGACGGTGATCGACGACGGGGTCTCGAAGCGGCTCACGCTGAAGGCGGGAACGAACATCGTGCGTGCCGC CATCGTTAACGGTGGTGGAGCGACCGATTTCTGCGCGCGCTTTCTCGATTCGGATGATAAGCCGCTGAAGGAGTTCACCG TCAGTCTCACCGCTGGAGGTGCCGCTGCGGCACGCGTCGCGCCGCGGCCGGCGATCGAGCAGCAACTGACCTTCGCGCCA TATCACTCCAGCGATATCTACGACGTCGGTGAGACCGTAGGCTGGGTCGTCACGCCGGGCCCGGCAAAGCCCGCGTACCA CTTCAAATGGGCGATTCGCCGGAACAATGCGGTCGTGCTTAAAGAGGGCAAGCTCGATCTCTCCTCGGGTCGCGACAAAA TCGAGATTGCGGGCGACCAGCCGGAGATGCTCTATGTCGCTGTGGAACCAGACGATCCCAAAAGCGAATCCGGCTACACG GGGGGCAATACCGGTCGCAACAACGGACTCTATGCGGTGGGCGCGGCCGTCGCACCCGCCCGACTCGCACTTTCGATGCC GCGCCCGGCCGATTTCGATGCATTCTGGGAAGGCAAATTGGCTGCCCAGGCTAGGGTGCCCATTCAGCCGGTTCTCACGC CGGTCCCGACGGAAGTGCCGGGAGTCGAGTTGAATCTGTTCGTCCTGGACGCGCTCGGATCCAAGGCCCACGGCTATCTC GCCAAACCGGCGCGCGAAGGAAAGTTTCCGGCGCTCATCCAGTTGCAGTACGCGGGCGTTTATGCTTTGAATGCCCGTGG AGCGGCGCAGCGGGCCGCGGAAGGGTGGCTGTTTTTGAATGTCGATTCCCACGACAAGCTCCCCTCAGACCCGTCCGGAA ACGTCCCGCGAAACTATCAGGCGGTAGGGAATACGGATCGCGAGAAGTCATACTTCCTGAACATGTATCTGCGCGATTCG CGGGTTCTGGACTACCTCCTCACGCGGCCCGATTGGGACGGGAAGACGATCGTCCTCACGGGAGGGAGTATGGGCGGCCA GCAGAGTCTGGTGCTCGCCGGCCTGCGTCCGGAAAAGATCACCGCCGTGCTGGTCTGTGTACCCGCGGGCGCCGACACCA ATGGCGATCTTCACGGGCGGAAAGCAGGTTATCCGAACTGGCCGTCCGACAACCCCGACGTGATGAAGACGGCGCTCTAC TTCGATACCGTCAACTTCGCGCCGCACATCCAGGCGCCGGTAATGGCGGGCATGGGGTTCATCGACACGATATCGCCGCC TGCCGGCGTATGGACCGCGCTCAACCAGATCCCCGGTCCGAAAGAACTTCTGCCGATGATCGAATCCGAGCACGACAACC TGACGCCCCAAAAGGGACGCGCCTGTCCGGCCCGAACCAAGGAACTCCTTGACGTCTTGGTGAAGGGGGGCGAGTTCCAC CCCAACGGCATAAAGCAATGA
Upstream 100 bases:
>100_bases CCAATCAAGCGCTGGCACTTTCGGCCGTGGGCAGCAGCTACGCCACCCTGGCCAAATTGGATGCCGCCAGCGAAAAGCAG CGGTGGCTGATCAAGACGCC
Downstream 100 bases:
>100_bases ACCGAAGGAGGCCCCACGTGAGACTGCTGTTCGCCGCGGCTCTGGCCGCCGGAGTACTATATGGCCAGCGAGGTCCGACG CCGTACTACGAGGATACAAA
Product: Acetyl xylan esterase
Products: NA
Alternate protein names: Cephalosporin-C Deacetylase; Family 7 Carbohydrate Esterase; S-Deacylase; Family; Acetyl Xylan Esterase Superfamily; Acetyl Esterase; Esterase
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MRIHRKAIAAVWALAAVATAQVAPVTLTAPASPQQAPNSDGFIQRWLLLEPIETNGLTESAVQAAVKREYFPDQLTVVPR DGDKVMAGASQLTWHAVDTSNYNVNLYHFAHALGKPTSNVLFWAVTIVNLPREMSGVRLAIGSNAASVWWVNGQEVIGIY GDRQTVIDDGVSKRLTLKAGTNIVRAAIVNGGGATDFCARFLDSDDKPLKEFTVSLTAGGAAAARVAPRPAIEQQLTFAP YHSSDIYDVGETVGWVVTPGPAKPAYHFKWAIRRNNAVVLKEGKLDLSSGRDKIEIAGDQPEMLYVAVEPDDPKSESGYT GGNTGRNNGLYAVGAAVAPARLALSMPRPADFDAFWEGKLAAQARVPIQPVLTPVPTEVPGVELNLFVLDALGSKAHGYL AKPAREGKFPALIQLQYAGVYALNARGAAQRAAEGWLFLNVDSHDKLPSDPSGNVPRNYQAVGNTDREKSYFLNMYLRDS RVLDYLLTRPDWDGKTIVLTGGSMGGQQSLVLAGLRPEKITAVLVCVPAGADTNGDLHGRKAGYPNWPSDNPDVMKTALY FDTVNFAPHIQAPVMAGMGFIDTISPPAGVWTALNQIPGPKELLPMIESEHDNLTPQKGRACPARTKELLDVLVKGGEFH PNGIKQ
Sequences:
>Translated_646_residues MRIHRKAIAAVWALAAVATAQVAPVTLTAPASPQQAPNSDGFIQRWLLLEPIETNGLTESAVQAAVKREYFPDQLTVVPR DGDKVMAGASQLTWHAVDTSNYNVNLYHFAHALGKPTSNVLFWAVTIVNLPREMSGVRLAIGSNAASVWWVNGQEVIGIY GDRQTVIDDGVSKRLTLKAGTNIVRAAIVNGGGATDFCARFLDSDDKPLKEFTVSLTAGGAAAARVAPRPAIEQQLTFAP YHSSDIYDVGETVGWVVTPGPAKPAYHFKWAIRRNNAVVLKEGKLDLSSGRDKIEIAGDQPEMLYVAVEPDDPKSESGYT GGNTGRNNGLYAVGAAVAPARLALSMPRPADFDAFWEGKLAAQARVPIQPVLTPVPTEVPGVELNLFVLDALGSKAHGYL AKPAREGKFPALIQLQYAGVYALNARGAAQRAAEGWLFLNVDSHDKLPSDPSGNVPRNYQAVGNTDREKSYFLNMYLRDS RVLDYLLTRPDWDGKTIVLTGGSMGGQQSLVLAGLRPEKITAVLVCVPAGADTNGDLHGRKAGYPNWPSDNPDVMKTALY FDTVNFAPHIQAPVMAGMGFIDTISPPAGVWTALNQIPGPKELLPMIESEHDNLTPQKGRACPARTKELLDVLVKGGEFH PNGIKQ >Mature_646_residues MRIHRKAIAAVWALAAVATAQVAPVTLTAPASPQQAPNSDGFIQRWLLLEPIETNGLTESAVQAAVKREYFPDQLTVVPR DGDKVMAGASQLTWHAVDTSNYNVNLYHFAHALGKPTSNVLFWAVTIVNLPREMSGVRLAIGSNAASVWWVNGQEVIGIY GDRQTVIDDGVSKRLTLKAGTNIVRAAIVNGGGATDFCARFLDSDDKPLKEFTVSLTAGGAAAARVAPRPAIEQQLTFAP YHSSDIYDVGETVGWVVTPGPAKPAYHFKWAIRRNNAVVLKEGKLDLSSGRDKIEIAGDQPEMLYVAVEPDDPKSESGYT GGNTGRNNGLYAVGAAVAPARLALSMPRPADFDAFWEGKLAAQARVPIQPVLTPVPTEVPGVELNLFVLDALGSKAHGYL AKPAREGKFPALIQLQYAGVYALNARGAAQRAAEGWLFLNVDSHDKLPSDPSGNVPRNYQAVGNTDREKSYFLNMYLRDS RVLDYLLTRPDWDGKTIVLTGGSMGGQQSLVLAGLRPEKITAVLVCVPAGADTNGDLHGRKAGYPNWPSDNPDVMKTALY FDTVNFAPHIQAPVMAGMGFIDTISPPAGVWTALNQIPGPKELLPMIESEHDNLTPQKGRACPARTKELLDVLVKGGEFH PNGIKQ
Specific function: Unknown
COG id: COG3458
COG function: function code Q; Acetyl esterase (deacetylase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69486; Mature: 69486
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHRKAIAAVWALAAVATAQVAPVTLTAPASPQQAPNSDGFIQRWLLLEPIETNGLTES CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCHH AVQAAVKREYFPDQLTVVPRDGDKVMAGASQLTWHAVDTSNYNVNLYHFAHALGKPTSNV HHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCE LFWAVTIVNLPREMSGVRLAIGSNAASVWWVNGQEVIGIYGDRQTVIDDGVSKRLTLKAG EEEEEEEECCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCEECCCCCCCEEEEECC TNIVRAAIVNGGGATDFCARFLDSDDKPLKEFTVSLTAGGAAAARVAPRPAIEQQLTFAP CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCCCHHHCEEECC YHSSDIYDVGETVGWVVTPGPAKPAYHFKWAIRRNNAVVLKEGKLDLSSGRDKIEIAGDQ CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCEEEEECCCEECCCCCCEEEECCCC PEMLYVAVEPDDPKSESGYTGGNTGRNNGLYAVGAAVAPARLALSMPRPADFDAFWEGKL CCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHCCCHHEEECCCCCCCCCEECCCE AAQARVPIQPVLTPVPTEVPGVELNLFVLDALGSKAHGYLAKPAREGKFPALIQLQYAGV EEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCE YALNARGAAQRAAEGWLFLNVDSHDKLPSDPSGNVPRNYQAVGNTDREKSYFLNMYLRDS EEEECCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEECH RVLDYLLTRPDWDGKTIVLTGGSMGGQQSLVLAGLRPEKITAVLVCVPAGADTNGDLHGR HHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCC KAGYPNWPSDNPDVMKTALYFDTVNFAPHIQAPVMAGMGFIDTISPPAGVWTALNQIPGP CCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHHHCCCCHHCCCCCHHHHHHHHHCCCH KELLPMIESEHDNLTPQKGRACPARTKELLDVLVKGGEFHPNGIKQ HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRIHRKAIAAVWALAAVATAQVAPVTLTAPASPQQAPNSDGFIQRWLLLEPIETNGLTES CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCHH AVQAAVKREYFPDQLTVVPRDGDKVMAGASQLTWHAVDTSNYNVNLYHFAHALGKPTSNV HHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCE LFWAVTIVNLPREMSGVRLAIGSNAASVWWVNGQEVIGIYGDRQTVIDDGVSKRLTLKAG EEEEEEEECCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCEECCCCCCCEEEEECC TNIVRAAIVNGGGATDFCARFLDSDDKPLKEFTVSLTAGGAAAARVAPRPAIEQQLTFAP CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCCCHHHCEEECC YHSSDIYDVGETVGWVVTPGPAKPAYHFKWAIRRNNAVVLKEGKLDLSSGRDKIEIAGDQ CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCEEEEECCCEECCCCCCEEEECCCC PEMLYVAVEPDDPKSESGYTGGNTGRNNGLYAVGAAVAPARLALSMPRPADFDAFWEGKL CCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHCCCHHEEECCCCCCCCCEECCCE AAQARVPIQPVLTPVPTEVPGVELNLFVLDALGSKAHGYLAKPAREGKFPALIQLQYAGV EEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCE YALNARGAAQRAAEGWLFLNVDSHDKLPSDPSGNVPRNYQAVGNTDREKSYFLNMYLRDS EEEECCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEECH RVLDYLLTRPDWDGKTIVLTGGSMGGQQSLVLAGLRPEKITAVLVCVPAGADTNGDLHGR HHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCC KAGYPNWPSDNPDVMKTALYFDTVNFAPHIQAPVMAGMGFIDTISPPAGVWTALNQIPGP CCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHHHCCCCHHCCCCCHHHHHHHHHCCCH KELLPMIESEHDNLTPQKGRACPARTKELLDVLVKGGEFHPNGIKQ HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA