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The map label for this gene is yjbJ [C]

Identifier: 116622075

GI number: 116622075

Start: 3739043

End: 3739276

Strand: Reverse

Name: yjbJ [C]

Synonym: Acid_2962

Alternate gene names: 116622075

Gene position: 3739276-3739043 (Counterclockwise)

Preceding gene: 116622076

Following gene: 116622074

Centisome position: 37.52

GC content: 57.26

Gene sequence:

>234_bases
ATGAATTGGGATCAAATCGAAGGCAAGTGGAAGCAGTTCAGCGGTTCCGCCCAGGAGCAATGGGGCAAGCTGACCAGCGA
TGACCTGGCGACCCTGACGGGTCAAAAGGATCAACTGGTGGGCAAAATCCAGGAACGGTACGGGATCGCCAAAGCGGAGG
CGGAAGCGCAGGCCGACAAATGGTCCAAGGCGCTGCAGCCGAAAAAACACGAAAGCGCTGCAAGCCGTTTGTAG

Upstream 100 bases:

>100_bases
CGTCAACAGAATCGACGCGTCGAGTTGGTCGTCTCGGGAGACATCATCGGCGGCTTGATGCAGCCCACGGCCATCGTGGC
TGGACAGTAAGGAGAATGCC

Downstream 100 bases:

>100_bases
ATGATGATGTGCAGAAGCCCACTGTACCAGGTGGGCTTTTGCGCGTGAAAGTATTGGTCGCAAATGTCAATGACAATTGT
TAAGTGGATTTCGCTTCCCG

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MNWDQIEGKWKQFSGSAQEQWGKLTSDDLATLTGQKDQLVGKIQERYGIAKAEAEAQADKWSKALQPKKHESAASRL

Sequences:

>Translated_77_residues
MNWDQIEGKWKQFSGSAQEQWGKLTSDDLATLTGQKDQLVGKIQERYGIAKAEAEAQADKWSKALQPKKHESAASRL
>Mature_77_residues
MNWDQIEGKWKQFSGSAQEQWGKLTSDDLATLTGQKDQLVGKIQERYGIAKAEAEAQADKWSKALQPKKHESAASRL

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=61, Percent_Identity=57.3770491803279, Blast_Score=75, Evalue=9e-16,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 8647; Mature: 8647

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWDQIEGKWKQFSGSAQEQWGKLTSDDLATLTGQKDQLVGKIQERYGIAKAEAEAQADK
CCCCCCCCHHHHCCCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
WSKALQPKKHESAASRL
HHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MNWDQIEGKWKQFSGSAQEQWGKLTSDDLATLTGQKDQLVGKIQERYGIAKAEAEAQADK
CCCCCCCCHHHHCCCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
WSKALQPKKHESAASRL
HHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12835416 [H]