Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is yccK [H]
Identifier: 116622024
GI number: 116622024
Start: 3689983
End: 3690966
Strand: Direct
Name: yccK [H]
Synonym: Acid_2909
Alternate gene names: 116622024
Gene position: 3689983-3690966 (Clockwise)
Preceding gene: 116622023
Following gene: 116622025
Centisome position: 37.03
GC content: 58.43
Gene sequence:
>984_bases ATGCAAAAGCGAAACCTGGGAAAGAGCGGGCTGGAAGTGTCAGCCCTTGGCTTCGGCTGCATGGGCCTCAGCTTCGGCTT TGGCCCGGCTACCGAGAAGAGTGAGGCGATCAAGGTAATCCGCGCCGCTTATGACGGCGGCGTGACCTTCTTTGATACCG CCGAGGCATACGGTCCGTTTACCAACGAGGAGCTGGTCGGCGAAGCGCTGGCTCCGATTCGCGACAAGGTAGTCATCGCC ACCAAATTCGGCTTCGAAAGCGGAGTGCCAAACCAGGGCACGAACAGCAAGCCGGAACGGATCAGGGCGGTGGCGGAAGC GGCGCTGAAGCGCCTGAATACCGGTGTGATCGATCTGTTCTATCAGCACCGGGTGGACCCGAATGTGCCCATTGAAGATG TCGCCGGCACAGTCAGGGATCTGATTCGGGAGGGCAAGGTAAGGCACTTCGGTATGTCGGAAGCCGGTGCGGAGAACATT CGTCGCGCTCACCGCGTGCAGCCGGTTACAGCTCTTCAGAGTGAGTACTCGCTGTGGTGGCGGGAGCCGGAGAAGGAGAT TCTGCCGACACTGGAGGAACTCGGCATCGGCTTTGTCCCGTTCAGCCCGCTGGGAAAGGGTTTTCTGACCGGAGCCATTT CCGAAAAGACAGAGTTCGATAAGAGTGACTTCCGTAATATCGTTCCGCGCTTTTCCGCGGAAGCGCGAAAAGCGAACATG GCACTGGTGGATGTTCTTGGGAAGATCGCGGAGCAGAAGAAGGCGACGAAAGCGCAGATCGCCCTCGCCTGGCTGCTCGC TCAGAAGCCGTGGATTGTTCCGATTCCCGGAACCACCAAGCTGCATCGCGTGCAAGAGAATCTGGGCGGCGCGGAAGTGG AACTGACACCGGAAGAGTTGCAAACCATTCACCAGGCCATCTCCGAAATCGAGGTTCAAGGAGACCGATATCCGGCTCAC TACCAAAATCTGGTCAACCGGTAG
Upstream 100 bases:
>100_bases TCAGGGCGCGCGGATGGGGCGAGGCATTTTGTCGCTCTCCGGTGTGGAAGCGCCTGCAAAGCAGAGATGACCAGTAGCTG CTAGAAAGGAAGGAAGAACC
Downstream 100 bases:
>100_bases GTCTTGCTTGCGACCGGTCACGGCTTTGGTCCTCTTACTGCTCGCGAACGTGGACGACGTGATTGCAAAAGACGCGGGTC ATTTAGGAGCGCAGAATACC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQKRNLGKSGLEVSALGFGCMGLSFGFGPATEKSEAIKVIRAAYDGGVTFFDTAEAYGPFTNEELVGEALAPIRDKVVIA TKFGFESGVPNQGTNSKPERIRAVAEAALKRLNTGVIDLFYQHRVDPNVPIEDVAGTVRDLIREGKVRHFGMSEAGAENI RRAHRVQPVTALQSEYSLWWREPEKEILPTLEELGIGFVPFSPLGKGFLTGAISEKTEFDKSDFRNIVPRFSAEARKANM ALVDVLGKIAEQKKATKAQIALAWLLAQKPWIVPIPGTTKLHRVQENLGGAEVELTPEELQTIHQAISEIEVQGDRYPAH YQNLVNR
Sequences:
>Translated_327_residues MQKRNLGKSGLEVSALGFGCMGLSFGFGPATEKSEAIKVIRAAYDGGVTFFDTAEAYGPFTNEELVGEALAPIRDKVVIA TKFGFESGVPNQGTNSKPERIRAVAEAALKRLNTGVIDLFYQHRVDPNVPIEDVAGTVRDLIREGKVRHFGMSEAGAENI RRAHRVQPVTALQSEYSLWWREPEKEILPTLEELGIGFVPFSPLGKGFLTGAISEKTEFDKSDFRNIVPRFSAEARKANM ALVDVLGKIAEQKKATKAQIALAWLLAQKPWIVPIPGTTKLHRVQENLGGAEVELTPEELQTIHQAISEIEVQGDRYPAH YQNLVNR >Mature_327_residues MQKRNLGKSGLEVSALGFGCMGLSFGFGPATEKSEAIKVIRAAYDGGVTFFDTAEAYGPFTNEELVGEALAPIRDKVVIA TKFGFESGVPNQGTNSKPERIRAVAEAALKRLNTGVIDLFYQHRVDPNVPIEDVAGTVRDLIREGKVRHFGMSEAGAENI RRAHRVQPVTALQSEYSLWWREPEKEILPTLEELGIGFVPFSPLGKGFLTGAISEKTEFDKSDFRNIVPRFSAEARKANM ALVDVLGKIAEQKKATKAQIALAWLLAQKPWIVPIPGTTKLHRVQENLGGAEVELTPEELQTIHQAISEIEVQGDRYPAH YQNLVNR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436971, Length=319, Percent_Identity=30.7210031347962, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI27436964, Length=308, Percent_Identity=31.1688311688312, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI27436962, Length=308, Percent_Identity=31.1688311688312, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI27436966, Length=308, Percent_Identity=31.1688311688312, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27436969, Length=307, Percent_Identity=28.9902280130293, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI4504825, Length=304, Percent_Identity=28.9473684210526, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI223718702, Length=202, Percent_Identity=31.1881188118812, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI41152114, Length=202, Percent_Identity=30.1980198019802, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI41327764, Length=162, Percent_Identity=30.8641975308642, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=30.8157099697885, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788070, Length=338, Percent_Identity=29.2899408284024, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1787674, Length=302, Percent_Identity=29.1390728476821, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788081, Length=309, Percent_Identity=25.8899676375405, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789199, Length=352, Percent_Identity=27.8409090909091, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994888, Length=287, Percent_Identity=26.8292682926829, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=29.5522388059701, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6325384, Length=337, Percent_Identity=27.893175074184, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=326, Percent_Identity=26.6871165644172, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=24.6621621621622, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=299, Percent_Identity=24.7491638795987, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=24.3027888446215, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24640980, Length=319, Percent_Identity=24.1379310344828, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI45549126, Length=319, Percent_Identity=24.1379310344828, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24646155, Length=158, Percent_Identity=32.9113924050633, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24646159, Length=222, Percent_Identity=25.6756756756757, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36022; Mature: 36022
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRNLGKSGLEVSALGFGCMGLSFGFGPATEKSEAIKVIRAAYDGGVTFFDTAEAYGPF CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHCCCC TNEELVGEALAPIRDKVVIATKFGFESGVPNQGTNSKPERIRAVAEAALKRLNTGVIDLF CCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH YQHRVDPNVPIEDVAGTVRDLIREGKVRHFGMSEAGAENIRRAHRVQPVTALQSEYSLWW HHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH REPEKEILPTLEELGIGFVPFSPLGKGFLTGAISEKTEFDKSDFRNIVPRFSAEARKANM CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALVDVLGKIAEQKKATKAQIALAWLLAQKPWIVPIPGTTKLHRVQENLGGAEVELTPEEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHH QTIHQAISEIEVQGDRYPAHYQNLVNR HHHHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MQKRNLGKSGLEVSALGFGCMGLSFGFGPATEKSEAIKVIRAAYDGGVTFFDTAEAYGPF CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHCCCC TNEELVGEALAPIRDKVVIATKFGFESGVPNQGTNSKPERIRAVAEAALKRLNTGVIDLF CCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH YQHRVDPNVPIEDVAGTVRDLIREGKVRHFGMSEAGAENIRRAHRVQPVTALQSEYSLWW HHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH REPEKEILPTLEELGIGFVPFSPLGKGFLTGAISEKTEFDKSDFRNIVPRFSAEARKANM CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALVDVLGKIAEQKKATKAQIALAWLLAQKPWIVPIPGTTKLHRVQENLGGAEVELTPEEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHH QTIHQAISEIEVQGDRYPAHYQNLVNR HHHHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]