Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is 116622003

Identifier: 116622003

GI number: 116622003

Start: 3660940

End: 3661617

Strand: Direct

Name: 116622003

Synonym: Acid_2888

Alternate gene names: NA

Gene position: 3660940-3661617 (Clockwise)

Preceding gene: 116622000

Following gene: 116622004

Centisome position: 36.74

GC content: 59.73

Gene sequence:

>678_bases
GTGATCGAGATGCAAACGGCGGGCGGGGGAGTCATTATTTTGCATCGCCTGCGGGCGGAGCGGAATCCGCTTCGGGCAGT
GGGAAAACTCAAAGTAATACCAATTTTTGCCTTATTGAGCTTAGGGGCCCTGGCGCAGGAGCGGTACGAGCTGGGAGGCG
AGGTAACGGCGATGAGCGGCGCGACGCTGGGCGGCATCGGGACACATGCAGTACTGTCGGGAAGCGCCGGCGACAGCTTT
TCGCGTTACCTTTCGGGGGTGGTGGAGGTCGCGGTAATTCCGATGAACAACCGGACGCTGCTGCCTGCCGCGGCGCTTGG
GGTGAAGGGCTCCGACCTGTTCGATTTCAACTTCGCGCTGCACGGCGGAGTACCCATCAAGAAATGGGAGCCTTATGGAA
TATTCGGGCTGGGTGTACTGATGAACCCATATACGGCGGCGCTGCTGGACGCGACGGGGGCGGTAGCATATGTGGGCCAG
CGTCACTCCAAGTTCGCGGTGCAATATGGCGCAGGGTGCCGTTACAACGTGGGCGAGAGATGGGGCGTGAAGGCCGAGTA
CCGGTACACCTCGTCGGCGCAGAATTTCAACCGGATCATGGGAGGTGTGTATTACCGGTTCGAAGATCACGGAGTATTCG
GGTTTTTGCCGGCATTTGCGCATCGCCTGATGCGATGA

Upstream 100 bases:

>100_bases
CGGCATGGTCATCTTCAGTGGAACTGACTGAGAGAATGCGGATTTCCTGTGTTCGTCCCAACCCGAGCGTAAACTCGCCT
GTCACGATTTCTTCTCCTTA

Downstream 100 bases:

>100_bases
ACCGGGGGGATGTGCTACTTAGGACATTCAGATCTTGATTTGAGATGGCATCGCGATTCTGTGATAATGCGCTTTAGTGG
ACCTTGGCGCCGGGATCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIEMQTAGGGVIILHRLRAERNPLRAVGKLKVIPIFALLSLGALAQERYELGGEVTAMSGATLGGIGTHAVLSGSAGDSF
SRYLSGVVEVAVIPMNNRTLLPAAALGVKGSDLFDFNFALHGGVPIKKWEPYGIFGLGVLMNPYTAALLDATGAVAYVGQ
RHSKFAVQYGAGCRYNVGERWGVKAEYRYTSSAQNFNRIMGGVYYRFEDHGVFGFLPAFAHRLMR

Sequences:

>Translated_225_residues
MIEMQTAGGGVIILHRLRAERNPLRAVGKLKVIPIFALLSLGALAQERYELGGEVTAMSGATLGGIGTHAVLSGSAGDSF
SRYLSGVVEVAVIPMNNRTLLPAAALGVKGSDLFDFNFALHGGVPIKKWEPYGIFGLGVLMNPYTAALLDATGAVAYVGQ
RHSKFAVQYGAGCRYNVGERWGVKAEYRYTSSAQNFNRIMGGVYYRFEDHGVFGFLPAFAHRLMR
>Mature_225_residues
MIEMQTAGGGVIILHRLRAERNPLRAVGKLKVIPIFALLSLGALAQERYELGGEVTAMSGATLGGIGTHAVLSGSAGDSF
SRYLSGVVEVAVIPMNNRTLLPAAALGVKGSDLFDFNFALHGGVPIKKWEPYGIFGLGVLMNPYTAALLDATGAVAYVGQ
RHSKFAVQYGAGCRYNVGERWGVKAEYRYTSSAQNFNRIMGGVYYRFEDHGVFGFLPAFAHRLMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24234; Mature: 24234

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMQTAGGGVIILHRLRAERNPLRAVGKLKVIPIFALLSLGALAQERYELGGEVTAMSG
CEEEEECCCCEEEEEEHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
ATLGGIGTHAVLSGSAGDSFSRYLSGVVEVAVIPMNNRTLLPAAALGVKGSDLFDFNFAL
CEECCCCCCEEEECCCCCHHHHHHHHEEEEEEEECCCCEECCHHHCCCCCCCEEEEEEEE
HGGVPIKKWEPYGIFGLGVLMNPYTAALLDATGAVAYVGQRHSKFAVQYGAGCRYNVGER
ECCCCCCCCCCCCEEEHHHHHCCHHHHHHHCCCCEEECCCCCCEEEEEECCCCEECCCCC
WGVKAEYRYTSSAQNFNRIMGGVYYRFEDHGVFGFLPAFAHRLMR
CCCEEEEEECCCHHHHHHHHCEEEEEEECCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MIEMQTAGGGVIILHRLRAERNPLRAVGKLKVIPIFALLSLGALAQERYELGGEVTAMSG
CEEEEECCCCEEEEEEHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
ATLGGIGTHAVLSGSAGDSFSRYLSGVVEVAVIPMNNRTLLPAAALGVKGSDLFDFNFAL
CEECCCCCCEEEECCCCCHHHHHHHHEEEEEEEECCCCEECCHHHCCCCCCCEEEEEEEE
HGGVPIKKWEPYGIFGLGVLMNPYTAALLDATGAVAYVGQRHSKFAVQYGAGCRYNVGER
ECCCCCCCCCCCCEEEHHHHHCCHHHHHHHCCCCEEECCCCCCEEEEEECCCCEECCCCC
WGVKAEYRYTSSAQNFNRIMGGVYYRFEDHGVFGFLPAFAHRLMR
CCCEEEEEECCCHHHHHHHHCEEEEEEECCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA