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The map label for this gene is 116621993

Identifier: 116621993

GI number: 116621993

Start: 3642802

End: 3643947

Strand: Reverse

Name: 116621993

Synonym: Acid_2878

Alternate gene names: NA

Gene position: 3643947-3642802 (Counterclockwise)

Preceding gene: 116621994

Following gene: 116621990

Centisome position: 36.57

GC content: 60.65

Gene sequence:

>1146_bases
ATGAAAAAGGATAGCATCGCAAGACTGCAGGTGACGAAGAGCCAGATTCGCCGAATGGCAGCAAAACAGAGGCTGACCGT
AGGGTTGGACCTCGGAGATCGTTCGAGCCGCTACTGCATTTTGGATGAAGCGGGAGAGAAAGCGAGCGAAGACCAGCTGC
CGACGAGCAAGGCGGGACTGGACATGCTCTTTGCCAAGATGGCGCCCTGCCGGATCGCGCTGGAGGTGGGAACGCATTCG
CCGTGGGTAAGCCGGCACCTGGCGGCGATGGGGCATGAAGTGATCGTGGCCAATCCGCGCAAGGTAAGGCTGATCACGCA
GAGTGTGAAGAAGAACGACCGGATGGACGCGGAGCAGTTGGCGCGGCTGGCGCGAGTCGATCCGCGGCTGTTAGCGCCGA
TCCGCCACCGGGGGCCGGAAGCGCAAGCCGACCTGGCGGTGATCCGAGCGCGGGCGGAATTGGTGGAGGGGCGGACGAAG
TTGATCAATGCGGCGCGGGGTCTGACCAAGCCGATGGGCGAACGGCTGAAGAGCTGTGACGCCGATACCGTAAAGGAATC
GATGGCAGACGGGCTTAGCGAAGCAACACAAAAGGTGATACGGCCGTTGTTGAAGAGCGTGGAAGTGATCACGCAGCAAA
TCAAGGTGTACGACCAGCAGATCCAGGAGATCGAGAAACGCTACCCGGAGACGAAGTTGCTGAAGCAAGTGCATGGAGTG
GGCCCACTGGTCTCGTTGGCCTTCATCCTGACGTTGGAAGACGCAGAGCGGTTTGAGCACAGCCGGGACGTGGGACCGTA
TCTGGGGCTGACGAGGAAACAGCGGGAGAGCGGGGAGAGCGCGCCGGAGTTAGGGATCAGCAAGGCGGGGGATGAGTTAG
TGCGACGGCTGTTGGTGCAGGCCGCGCACTGCATTCTGCGGGAAGATGCACCGGATAGCGATCTGAAGGCGTGGGGGCTG
ACGAAGGTGGGTGCCGGAGCAGGGAAGAAAGGCAGCAAGAGCCGGAAGAAGAAAGCGGTGGTGGCGGTGGCGCGGAAGTT
GGCGGTGTTGCTACACCATTTGTGGGTAACGGGGGAAGTGTACGACCCGCAATACAATCGCAAAGCGGTAGAGGCAAGCA
AAAGGAGCAAGAAAGCCGCCGCATAA

Upstream 100 bases:

>100_bases
CGCCGCCATCAGAGATGGTATGAGAAGGCCGGTCCCCCGCGCGGGATGTTTTAAAATCCCGGTAGACGCACTCGATCAGG
TGCAAAAAGGAGACCGGCTT

Downstream 100 bases:

>100_bases
GGAACGAGTTTTGGAAAGGATTGGAATTCTGCGGAGTATGCGAAGGCGCCGAGTTGGGGTGACTGCGAGGTCGCGGCAGA
ACGTCGGGAACCAGGCAACT

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRARAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLLKQVHGV
GPLVSLAFILTLEDAERFEHSRDVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAWGL
TKVGAGAGKKGSKSRKKKAVVAVARKLAVLLHHLWVTGEVYDPQYNRKAVEASKRSKKAAA

Sequences:

>Translated_381_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRARAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLLKQVHGV
GPLVSLAFILTLEDAERFEHSRDVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAWGL
TKVGAGAGKKGSKSRKKKAVVAVARKLAVLLHHLWVTGEVYDPQYNRKAVEASKRSKKAAA
>Mature_381_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRARAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLLKQVHGV
GPLVSLAFILTLEDAERFEHSRDVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAWGL
TKVGAGAGKKGSKSRKKKAVVAVARKLAVLLHHLWVTGEVYDPQYNRKAVEASKRSKKAAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42093; Mature: 42093

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
DMLFAKMAPCRIALEVGTHSPWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCHHHH
ARLARVDPRLLAPIRHRGPEAQADLAVIRARAELVEGRTKLINAARGLTKPMGERLKSCD
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLLKQVHGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GPLVSLAFILTLEDAERFEHSRDVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQ
CHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAHCILREDAPDSDLKAWGLTKVGAGAGKKGSKSRKKKAVVAVARKLAVLLHHLWVTGEV
HHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
YDPQYNRKAVEASKRSKKAAA
ECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
DMLFAKMAPCRIALEVGTHSPWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCHHHH
ARLARVDPRLLAPIRHRGPEAQADLAVIRARAELVEGRTKLINAARGLTKPMGERLKSCD
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLLKQVHGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GPLVSLAFILTLEDAERFEHSRDVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQ
CHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAHCILREDAPDSDLKAWGLTKVGAGAGKKGSKSRKKKAVVAVARKLAVLLHHLWVTGEV
HHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
YDPQYNRKAVEASKRSKKAAA
ECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]