Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621981
Identifier: 116621981
GI number: 116621981
Start: 3627600
End: 3628376
Strand: Direct
Name: 116621981
Synonym: Acid_2866
Alternate gene names: NA
Gene position: 3627600-3628376 (Clockwise)
Preceding gene: 116621978
Following gene: 116621982
Centisome position: 36.4
GC content: 60.23
Gene sequence:
>777_bases TTGCCGGTGGCGCATCTGCGAAACTGGCCTTTCATGCACTTCAAGCTGCTGCTGCCGCTCCTCGTCTGTGCGCCGCTCGT CTATTCCCAGAGCAGCAGCCTGCCTCCCAAAGAAACCCTGCACTACAACATCGAATGGCGGCTCTTTAGCGCGGGCAAGG CCAAGGTGGAGTTGACTAACAGCGGCGGCGCCAGGCCCGTGCTGCAAACCAACCTGCGCCTGGAGTCCTCCGGCATCGTC TCCAAGCTCTTCAAGGTCGAGGACGATTACTCCGCGGTCCTCAATCCGGGCTACTGCGTGCAGACCCTGCAGATGACCAC GCACGAAGGGAATCGCCAGCGCGAAACCAAAGTGACCTTCGACCCGGAGTCCAAGAAGGCCAGCTACCTGGAGCGGGACC TCGCCAAAAACAATGCGGTCGTACTCGCGCAGGAGACCGAGATCCCGGCTTGCGTGCACGACGTCTTGGGCGGCCTGTTC TTCATCCGCACCCTGAGCCTCGAGCCCGGCCAGAGCACGCAAATTCCCGTGAGCGATGGCAAGAAGAGCGTAATGGTGAA GGTGGAAGCGCAGGCGCGTGAAGACGTGAAAACTCCAGAGGGGACCTTCAAAACCGTTCGCTACGAAGTTTATCTCTTCA ACGGCGTGCTCTACAAACGCCCCGCGCACTTGAGTCTCTGGGTGTCCGACGATCGCCGCCGGCTTCCGGTGCAGATCCGC GTGCGCATGACCTTCACGATCGGCACCATCCTGCTGCAATTGGAAAAACACGAGTAA
Upstream 100 bases:
>100_bases CCGATCCCGGTGGACCCGGTGATAATCAGGACTTTTTCGCGCACCTTCCTTCTAATGTATCCCGCCAGGCTGAAGCCCGC GAAGGTGAAGTATGATTGCG
Downstream 100 bases:
>100_bases TGCGGAGAGCGGCGCTCCTCTTCCTGCTGGCGCAGTCGGCGCCCGCAATGGAACTGCACATTCAGTTCGGCGCGCTGGAA CGAATGCTCACCGAACAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPVAHLRNWPFMHFKLLLPLLVCAPLVYSQSSSLPPKETLHYNIEWRLFSAGKAKVELTNSGGARPVLQTNLRLESSGIV SKLFKVEDDYSAVLNPGYCVQTLQMTTHEGNRQRETKVTFDPESKKASYLERDLAKNNAVVLAQETEIPACVHDVLGGLF FIRTLSLEPGQSTQIPVSDGKKSVMVKVEAQAREDVKTPEGTFKTVRYEVYLFNGVLYKRPAHLSLWVSDDRRRLPVQIR VRMTFTIGTILLQLEKHE
Sequences:
>Translated_258_residues MPVAHLRNWPFMHFKLLLPLLVCAPLVYSQSSSLPPKETLHYNIEWRLFSAGKAKVELTNSGGARPVLQTNLRLESSGIV SKLFKVEDDYSAVLNPGYCVQTLQMTTHEGNRQRETKVTFDPESKKASYLERDLAKNNAVVLAQETEIPACVHDVLGGLF FIRTLSLEPGQSTQIPVSDGKKSVMVKVEAQAREDVKTPEGTFKTVRYEVYLFNGVLYKRPAHLSLWVSDDRRRLPVQIR VRMTFTIGTILLQLEKHE >Mature_257_residues PVAHLRNWPFMHFKLLLPLLVCAPLVYSQSSSLPPKETLHYNIEWRLFSAGKAKVELTNSGGARPVLQTNLRLESSGIVS KLFKVEDDYSAVLNPGYCVQTLQMTTHEGNRQRETKVTFDPESKKASYLERDLAKNNAVVLAQETEIPACVHDVLGGLFF IRTLSLEPGQSTQIPVSDGKKSVMVKVEAQAREDVKTPEGTFKTVRYEVYLFNGVLYKRPAHLSLWVSDDRRRLPVQIRV RMTFTIGTILLQLEKHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29238; Mature: 29107
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAHLRNWPFMHFKLLLPLLVCAPLVYSQSSSLPPKETLHYNIEWRLFSAGKAKVELTN CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEEECCCEEEEEEC SGGARPVLQTNLRLESSGIVSKLFKVEDDYSAVLNPGYCVQTLQMTTHEGNRQRETKVTF CCCCCCEEEECEEECCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE DPESKKASYLERDLAKNNAVVLAQETEIPACVHDVLGGLFFIRTLSLEPGQSTQIPVSDG CCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHEEHHEECCCCCCCCEEECCCC KKSVMVKVEAQAREDVKTPEGTFKTVRYEVYLFNGVLYKRPAHLSLWVSDDRRRLPVQIR CEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCEEEEEECCCCCCCCEEEE VRMTFTIGTILLQLEKHE EEEEEEEEEEEEEEECCC >Mature Secondary Structure PVAHLRNWPFMHFKLLLPLLVCAPLVYSQSSSLPPKETLHYNIEWRLFSAGKAKVELTN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEEECCCEEEEEEC SGGARPVLQTNLRLESSGIVSKLFKVEDDYSAVLNPGYCVQTLQMTTHEGNRQRETKVTF CCCCCCEEEECEEECCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE DPESKKASYLERDLAKNNAVVLAQETEIPACVHDVLGGLFFIRTLSLEPGQSTQIPVSDG CCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHEEHHEECCCCCCCCEEECCCC KKSVMVKVEAQAREDVKTPEGTFKTVRYEVYLFNGVLYKRPAHLSLWVSDDRRRLPVQIR CEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCEEEEEECCCCCCCCEEEE VRMTFTIGTILLQLEKHE EEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA