Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621962
Identifier: 116621962
GI number: 116621962
Start: 3607558
End: 3608172
Strand: Reverse
Name: 116621962
Synonym: Acid_2847
Alternate gene names: NA
Gene position: 3608172-3607558 (Counterclockwise)
Preceding gene: 116621963
Following gene: 116621960
Centisome position: 36.21
GC content: 63.74
Gene sequence:
>615_bases ATGCTGGTGGTGGTGGGCGGTCACTCGAGAAACATCGGAAAGACGGGGCTCGCGGCGGGGCTGATCCGGCGGACGCGCGG GATGAAGTGGACGGCGCTGAAGATCACGCAATATGGGAACGCGGTGTGCTCGCGGCACACGGTGGAATCGACGTGCGGAT GCGAGCCTGGCAACGGCGAGGAGTTCGCGCTGGATGAGGAGTTCGAGGCGAACGACACGGATTCGGGGCGGTTCCTGGGC GCGGGCGCAGAGCGGAGTTTCTGGCTGCGGGTGCCGGCCGGGGAGTTGCCGCGGGCGGCGGGGCTGGTGCGCAAGATTCT GGCGCAGGGCGAGAACGTGATCGTGGAATCGAACAGCGTGGTGGAGCTGGTACAACCCGATGTCTTCCTGATGATCCTGG ATTTTTCGTGCGAGGACTTCAAGCCATCGAGCCTGCGGTTCATGGACCGGGCGGATGGGTTCGTGGTGATCGATCGCGGA ATCAATGCGCCTTTATGGGCCGAGGTGGCGCAAGGGATGTGGGACGGAAAGCCGCAATTCCTGGTGACGCCGCCGCGATA CGCGACTACGGAGATTGTGGATTTCGTGAAGTCGAAGGCAGCGGAACGAGCCTAG
Upstream 100 bases:
>100_bases TCATCTGGAAGAGCTGGCGAGTTTGGGGAGACTGCCCGAGCTGCGCAAGGAGATGAGCGATTTGAAGCGGCGGCTGGCAG AGTTGGAGAGGAAGGCCTGA
Downstream 100 bases:
>100_bases GAGCGCAGACGGCGCAATTCCGCAGCGGCTTCGGAGAGTAGAGTGGCGGCGCGTGCCACCTGCTGTTCGATGGAGCGGAC ATGCTCGAGGGCGCGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLVVVGGHSRNIGKTGLAAGLIRRTRGMKWTALKITQYGNAVCSRHTVESTCGCEPGNGEEFALDEEFEANDTDSGRFLG AGAERSFWLRVPAGELPRAAGLVRKILAQGENVIVESNSVVELVQPDVFLMILDFSCEDFKPSSLRFMDRADGFVVIDRG INAPLWAEVAQGMWDGKPQFLVTPPRYATTEIVDFVKSKAAERA
Sequences:
>Translated_204_residues MLVVVGGHSRNIGKTGLAAGLIRRTRGMKWTALKITQYGNAVCSRHTVESTCGCEPGNGEEFALDEEFEANDTDSGRFLG AGAERSFWLRVPAGELPRAAGLVRKILAQGENVIVESNSVVELVQPDVFLMILDFSCEDFKPSSLRFMDRADGFVVIDRG INAPLWAEVAQGMWDGKPQFLVTPPRYATTEIVDFVKSKAAERA >Mature_204_residues MLVVVGGHSRNIGKTGLAAGLIRRTRGMKWTALKITQYGNAVCSRHTVESTCGCEPGNGEEFALDEEFEANDTDSGRFLG AGAERSFWLRVPAGELPRAAGLVRKILAQGENVIVESNSVVELVQPDVFLMILDFSCEDFKPSSLRFMDRADGFVVIDRG INAPLWAEVAQGMWDGKPQFLVTPPRYATTEIVDFVKSKAAERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22309; Mature: 22309
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVVGGHSRNIGKTGLAAGLIRRTRGMKWTALKITQYGNAVCSRHTVESTCGCEPGNGE CEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCC EFALDEEFEANDTDSGRFLGAGAERSFWLRVPAGELPRAAGLVRKILAQGENVIVESNSV CEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCE VELVQPDVFLMILDFSCEDFKPSSLRFMDRADGFVVIDRGINAPLWAEVAQGMWDGKPQF EEEECCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCE LVTPPRYATTEIVDFVKSKAAERA EECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLVVVGGHSRNIGKTGLAAGLIRRTRGMKWTALKITQYGNAVCSRHTVESTCGCEPGNGE CEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCC EFALDEEFEANDTDSGRFLGAGAERSFWLRVPAGELPRAAGLVRKILAQGENVIVESNSV CEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCE VELVQPDVFLMILDFSCEDFKPSSLRFMDRADGFVVIDRGINAPLWAEVAQGMWDGKPQF EEEECCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCE LVTPPRYATTEIVDFVKSKAAERA EECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA