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The map label for this gene is 116621845

Identifier: 116621845

GI number: 116621845

Start: 3457655

End: 3458464

Strand: Reverse

Name: 116621845

Synonym: Acid_2727

Alternate gene names: NA

Gene position: 3458464-3457655 (Counterclockwise)

Preceding gene: 116621849

Following gene: 116621843

Centisome position: 34.7

GC content: 66.67

Gene sequence:

>810_bases
GTGCGGTGCGGACGTAAGCCCGAAGACACTCTGACCACGGAGTACTCCGCGCCCTTCGTTCACGGCGCGCTGGCTACACA
GTTGCAGCCGCGCGTTCACGTGATGGAGCCGGCCGCGCAGGCCGAGGCCAAGGCGCCCAATCTCTCGGGTGCAGTGCAGG
CATCGCTCTTCCAGGACCGTTCCGCCAAAGTAGTTCCGATCGCGTCCTATGCCCCGCCGCGCATAGAGACTAAGCCGCGC
ACAGCAGCGCAGAAGGCCGCCCCCCGGCGCGCCAAGCCGGTCAACGAAGGCCAGGGCACGCTCGATTTCCTGCCGCCCGC
GCCCGCCAAGCCGCGACAGTTGGGCACCACGGTGGAAGCTGTAATCTACTGCGAAGCGCCGGTCGCGACCACGCTGCACC
GCGCCGTCGCGGCCGCGCTCGATTGGAGCATGGTCCTGATCGGTTACGGCATCTTCCTCACCGCCTTCCACATGTTCGGT
GGAGAATTCACGCTCACGAAAAGCAACCTCGGCATATTCGGCGCGATGTTCCTGATGGTCGGCTTCGCCTACGGACTGCT
CTTCAGCCTGGCTGGCGCCGAGACTCCCGGCATGCACTGGACGCAGCTTCGCCTGACTACCTTCGACGGCTTCCCGCCGG
AGCGCAGGCAGCGCCTCGTCCGGTTCTTCTCGGCCAGCCTGACGCGCTGCACCATGCTCGGGCTCCTGTGGTCGCTCGCC
GACGAAGAGAGCCTCGCCTGGCAGGATCACATCTCGCGCACCTTCCCCACGCCGCGCGAAGTCGATAGCCTGGTCTTCCG
CCGCCGGTAG

Upstream 100 bases:

>100_bases
GGCAATATAAAGCGGCCGGCAACCTGTGGCCTGACGGAAACAATGTGAAATGACCTGTCGTTACTGTGGGACTCGCAATG
GAGATGGTGAGCACCGGTGT

Downstream 100 bases:

>100_bases
ACGCGCCGCAACCGTAAGGGAGCGCTACCCGCTCACAATCCGCGAGATCGCTCCCTTACGTCTGCGGCTCATCTTGCTTC
CACCACTCGCAGCGCCGAAT

Product: RDD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRCGRKPEDTLTTEYSAPFVHGALATQLQPRVHVMEPAAQAEAKAPNLSGAVQASLFQDRSAKVVPIASYAPPRIETKPR
TAAQKAAPRRAKPVNEGQGTLDFLPPAPAKPRQLGTTVEAVIYCEAPVATTLHRAVAAALDWSMVLIGYGIFLTAFHMFG
GEFTLTKSNLGIFGAMFLMVGFAYGLLFSLAGAETPGMHWTQLRLTTFDGFPPERRQRLVRFFSASLTRCTMLGLLWSLA
DEESLAWQDHISRTFPTPREVDSLVFRRR

Sequences:

>Translated_269_residues
MRCGRKPEDTLTTEYSAPFVHGALATQLQPRVHVMEPAAQAEAKAPNLSGAVQASLFQDRSAKVVPIASYAPPRIETKPR
TAAQKAAPRRAKPVNEGQGTLDFLPPAPAKPRQLGTTVEAVIYCEAPVATTLHRAVAAALDWSMVLIGYGIFLTAFHMFG
GEFTLTKSNLGIFGAMFLMVGFAYGLLFSLAGAETPGMHWTQLRLTTFDGFPPERRQRLVRFFSASLTRCTMLGLLWSLA
DEESLAWQDHISRTFPTPREVDSLVFRRR
>Mature_269_residues
MRCGRKPEDTLTTEYSAPFVHGALATQLQPRVHVMEPAAQAEAKAPNLSGAVQASLFQDRSAKVVPIASYAPPRIETKPR
TAAQKAAPRRAKPVNEGQGTLDFLPPAPAKPRQLGTTVEAVIYCEAPVATTLHRAVAAALDWSMVLIGYGIFLTAFHMFG
GEFTLTKSNLGIFGAMFLMVGFAYGLLFSLAGAETPGMHWTQLRLTTFDGFPPERRQRLVRFFSASLTRCTMLGLLWSLA
DEESLAWQDHISRTFPTPREVDSLVFRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29593; Mature: 29593

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCGRKPEDTLTTEYSAPFVHGALATQLQPRVHVMEPAAQAEAKAPNLSGAVQASLFQDR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHCC
SAKVVPIASYAPPRIETKPRTAAQKAAPRRAKPVNEGQGTLDFLPPAPAKPRQLGTTVEA
CCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHCCEEEE
VIYCEAPVATTLHRAVAAALDWSMVLIGYGIFLTAFHMFGGEFTLTKSNLGIFGAMFLMV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
GFAYGLLFSLAGAETPGMHWTQLRLTTFDGFPPERRQRLVRFFSASLTRCTMLGLLWSLA
HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEESLAWQDHISRTFPTPREVDSLVFRRR
CCHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRCGRKPEDTLTTEYSAPFVHGALATQLQPRVHVMEPAAQAEAKAPNLSGAVQASLFQDR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHCC
SAKVVPIASYAPPRIETKPRTAAQKAAPRRAKPVNEGQGTLDFLPPAPAKPRQLGTTVEA
CCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHCCEEEE
VIYCEAPVATTLHRAVAAALDWSMVLIGYGIFLTAFHMFGGEFTLTKSNLGIFGAMFLMV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
GFAYGLLFSLAGAETPGMHWTQLRLTTFDGFPPERRQRLVRFFSASLTRCTMLGLLWSLA
HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEESLAWQDHISRTFPTPREVDSLVFRRR
CCHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA