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The map label for this gene is atpC

Identifier: 116619605

GI number: 116619605

Start: 570786

End: 571190

Strand: Direct

Name: atpC

Synonym: Acid_0466

Alternate gene names: 116619605

Gene position: 570786-571190 (Clockwise)

Preceding gene: 116619604

Following gene: 116619606

Centisome position: 5.73

GC content: 64.2

Gene sequence:

>405_bases
ATGCCCGACACTCTCGAACTCGAAGTCGCAACTCCCGAGCGCGAGCTGGTGCGCGAGCAGGTCACCGAAGTGCAGGTGCC
CGCGGCCCAGGGATATCTCGGCGTGCTTCCCGGTCACGCGCCTTTGTTGGGGCTGCTTGGGATCGGCACGTTGACGTATA
TGGTGGGCGGCAACAAACGCCACATTTCGGTCCATGGTGGTTTTCTGGAAGTACTCGAGGACCATGTCCGGGTGCTCGCC
GATGTGGCCGAGCGCGCCGAGGAAATTGATATCCAGCGCGCCAAAGCCGCCTTGGAACGTTCGCAGCGAGAGGCCCTGAA
TCCCGCGCTGGGAGTGGATCCGGCGGAGGCCCTGGCGGCTACCATGCGCGCTGAGGCCAGGCTCGCCACGGCCGACAAGA
AATAG

Upstream 100 bases:

>100_bases
GAAGGCAAGCACGATGGCGTCCCCGAACAGGCGTTCTACATGCAGGGGACCATCGAGGACGTGCTCGAAAAAGCGGAAGC
CATGAAGAAGGCGTAGCGCA

Downstream 100 bases:

>100_bases
GGTTCCGAACCGGGGGAAAGGCCAATGCAGTCCGGACCGCACGTCCGCTACGCCGTACTCATCCCCGCATACCGGCCTTC
GGACGGCCTCATCGATCTGG

Product: ATP synthase F1 subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPDTLELEVATPERELVREQVTEVQVPAAQGYLGVLPGHAPLLGLLGIGTLTYMVGGNKRHISVHGGFLEVLEDHVRVLA
DVAERAEEIDIQRAKAALERSQREALNPALGVDPAEALAATMRAEARLATADKK

Sequences:

>Translated_134_residues
MPDTLELEVATPERELVREQVTEVQVPAAQGYLGVLPGHAPLLGLLGIGTLTYMVGGNKRHISVHGGFLEVLEDHVRVLA
DVAERAEEIDIQRAKAALERSQREALNPALGVDPAEALAATMRAEARLATADKK
>Mature_133_residues
PDTLELEVATPERELVREQVTEVQVPAAQGYLGVLPGHAPLLGLLGIGTLTYMVGGNKRHISVHGGFLEVLEDHVRVLAD
VAERAEEIDIQRAKAALERSQREALNPALGVDPAEALAATMRAEARLATADKK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=130, Percent_Identity=36.9230769230769, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SOLUE (Q02BU0)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_821761.1
- ProteinModelPortal:   Q02BU0
- SMR:   Q02BU0
- STRING:   Q02BU0
- GeneID:   4431469
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_0466
- NMPDR:   fig|234267.9.peg.439
- eggNOG:   NOG149632
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- PhylomeDB:   Q02BU0
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14394; Mature: 14262

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTLELEVATPERELVREQVTEVQVPAAQGYLGVLPGHAPLLGLLGIGTLTYMVGGNKR
CCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEE
HISVHGGFLEVLEDHVRVLADVAERAEEIDIQRAKAALERSQREALNPALGVDPAEALAA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TMRAEARLATADKK
HHHHHHHHHCCCCC
>Mature Secondary Structure 
PDTLELEVATPERELVREQVTEVQVPAAQGYLGVLPGHAPLLGLLGIGTLTYMVGGNKR
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEE
HISVHGGFLEVLEDHVRVLADVAERAEEIDIQRAKAALERSQREALNPALGVDPAEALAA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TMRAEARLATADKK
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA