Click here to switch to the map view.

The map label for this gene is 116517198

Identifier: 116517198

GI number: 116517198

Start: 1778819

End: 1779127

Strand: Reverse

Name: 116517198

Synonym: SPD_1783

Alternate gene names: NA

Gene position: 1779127-1778819 (Counterclockwise)

Preceding gene: 116515516

Following gene: 116515767

Centisome position: 86.95

GC content: 39.81

Gene sequence:

>309_bases
ATGTGTGAAAAAATCCGTATTCGTAGGGTATCTGATTATCCTAGTGCCAGAGGTGGTTTAGAAGATATCCTCATCATGGA
AAATATGACCAATCATCTCCTTTTGGTTCAAATCCGAGTGCATGGCTATTTGCTTGATTTTGCTAGTATTGAAGGGCAAA
GGCAAAAGCATTATCGTTTGAAAAATTTACCTCAGACGGTTGAACTGACAGTGGATGATGTGGAGGAGGATGTGGATTTG
ACCCTACCCGAAAATCGAAGTTATCAAGAAGCTGATTTTTTTGAACGCATGTTTCGAGAGAACTGCTAA

Upstream 100 bases:

>100_bases
GTGGATTTGAAAGATGAAAATCGAATTATCATCATTGCGACCCATAATCCCCTAGTCTGGAATAAGGCTGATGAAATCAT
TGATATGAGGAAACTTGCTC

Downstream 100 bases:

>100_bases
GGCCACTTTTAAAGATTTCCAAGACTATCTTTCTTCATGAGGAAAGATAGTTTTTTGGTATGATTTTCATTCCCAAAATA
CAAGGGGAATGTGTTACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MCEKIRIRRVSDYPSARGGLEDILIMENMTNHLLLVQIRVHGYLLDFASIEGQRQKHYRLKNLPQTVELTVDDVEEDVDL
TLPENRSYQEADFFERMFRENC

Sequences:

>Translated_102_residues
MCEKIRIRRVSDYPSARGGLEDILIMENMTNHLLLVQIRVHGYLLDFASIEGQRQKHYRLKNLPQTVELTVDDVEEDVDL
TLPENRSYQEADFFERMFRENC
>Mature_102_residues
MCEKIRIRRVSDYPSARGGLEDILIMENMTNHLLLVQIRVHGYLLDFASIEGQRQKHYRLKNLPQTVELTVDDVEEDVDL
TLPENRSYQEADFFERMFRENC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12117; Mature: 12117

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEKIRIRRVSDYPSARGGLEDILIMENMTNHLLLVQIRVHGYLLDFASIEGQRQKHYRL
CCCCCEEEECCCCCCCCCCCHHEEEECCCCCEEEEEEEEECEEEEEHHHCCCCCHHHHHH
KNLPQTVELTVDDVEEDVDLTLPENRSYQEADFFERMFRENC
HCCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MCEKIRIRRVSDYPSARGGLEDILIMENMTNHLLLVQIRVHGYLLDFASIEGQRQKHYRL
CCCCCEEEECCCCCCCCCCCHHEEEECCCCCEEEEEEEEECEEEEEHHHCCCCCHHHHHH
KNLPQTVELTVDDVEEDVDLTLPENRSYQEADFFERMFRENC
HCCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA