| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is celB
Identifier: 116517077
GI number: 116517077
Start: 276406
End: 276720
Strand: Direct
Name: celB
Synonym: SPD_0279
Alternate gene names: NA
Gene position: 276406-276720 (Clockwise)
Preceding gene: 116515676
Following gene: 116516527
Centisome position: 13.51
GC content: 36.19
Gene sequence:
>315_bases ATGGCAAAAGCTTTAATTATTTGTGCAGCAGGAATGTCTTCATCACTTATGGCACAGAAAACAACAGAGTTTCTAAAAGG AAAAGGGAAAGATATTGTAGTTGATGCTATTAGTGCTACTGAAGGAGGGAAAGCTATCGCAGCAGCAGCTTTTGATTTGT ATCTTGTCAGCCCTCAAACAAAAATGTACTTTAAGCAATTTGAAGAGGCTGGTTCTAAAGCAGGAAAACCAGTTGTACAA ATACCTCCTCAAGCATATATTCCTATTCCAATGGGAATTGAAAAAATGGCTAATTTGATTCTTGAGAATATTTGA
Upstream 100 bases:
>100_bases GGAATTGTCATTGGAAACGCTTTATTTTATAATAAAAATAGATAACAAATAAGCCAACTTAGCACAGCTTTGATTGGATT TAAGAAAAGGAGAAAATATT
Downstream 100 bases:
>100_bases TGAACACATGAAATGTCAATAAATATTTAGGTTAAGATAAATTGTTTTGAGTTTGATATAAACTGATTTAAGTGTATAAT ATGCTTCAATATATGAAAAC
Product: cellobiose phosphotransferase system IIB component
Products: protein histidine; sugar phosphate
Alternate protein names: Phosphotransferase System Protein; PTS System Lactose/Cellobiose-Specific EIIB Component; Phosphotransferase System Sugar-Specific EII Component; PTS System Cellobiose Transporter Subunit IIB; PTS System IIB Component
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAKALIICAAGMSSSLMAQKTTEFLKGKGKDIVVDAISATEGGKAIAAAAFDLYLVSPQTKMYFKQFEEAGSKAGKPVVQ IPPQAYIPIPMGIEKMANLILENI
Sequences:
>Translated_104_residues MAKALIICAAGMSSSLMAQKTTEFLKGKGKDIVVDAISATEGGKAIAAAAFDLYLVSPQTKMYFKQFEEAGSKAGKPVVQ IPPQAYIPIPMGIEKMANLILENI >Mature_103_residues AKALIICAAGMSSSLMAQKTTEFLKGKGKDIVVDAISATEGGKAIAAAAFDLYLVSPQTKMYFKQFEEAGSKAGKPVVQI PPQAYIPIPMGIEKMANLILENI
Specific function: Unknown
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 11021; Mature: 10890
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALIICAAGMSSSLMAQKTTEFLKGKGKDIVVDAISATEGGKAIAAAAFDLYLVSPQT CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCH KMYFKQFEEAGSKAGKPVVQIPPQAYIPIPMGIEKMANLILENI HHHHHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHHHHHHCC >Mature Secondary Structure AKALIICAAGMSSSLMAQKTTEFLKGKGKDIVVDAISATEGGKAIAAAAFDLYLVSPQT CCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCH KMYFKQFEEAGSKAGKPVVQIPPQAYIPIPMGIEKMANLILENI HHHHHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA