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The map label for this gene is ytqB [H]

Identifier: 116516252

GI number: 116516252

Start: 589039

End: 589602

Strand: Direct

Name: ytqB [H]

Synonym: SPD_0567

Alternate gene names: 116516252

Gene position: 589039-589602 (Clockwise)

Preceding gene: 116517049

Following gene: 116516269

Centisome position: 28.79

GC content: 43.44

Gene sequence:

>564_bases
TTGAAAATGAAAAGACCACTTGAGATGGCACATGATTTTTTGGCTGAGGTCGTGACAAAAGAGGATGTCGTAGTGGATGC
GACTATGGGAAATGGTCATGACACGCTTTTTTTAGCCAAGCTAGCCAAGCAAGTCTATGCCTTTGATATTCAGAAGCAAG
CCTTGGAAAAGACCCAAGAGCGTTTGCATCAGGCTGGCTTGACAAATGCCCAGTTAATCTTGCAAGGCCATGAGACACTG
GACCAGTTTGTGACAAAAGCTAAGGCAGGGATTTTTAATTTGGGCTATTTGCCGTCAGCTGATAAGTCTGTCATCACCCG
ACCGCAGACAACGATTGAGGCATTAGAAAAGCTATGTGGCTTACTTGTCAAGGGTGGACGAATTGCTATTATGATTTACT
ATGGTCATGAAGGAGGCGACCTCGAGAGAGATGCTGTCTTGGATTTTGTAATCCAGTTGAACCAACAAGAGTACACAGCT
GCCATTTACCGAACTTTAAACCAAGTCAACAACCCGCCGTTTTTAGTGATGATTGAAAAATTAGAGAGATACAGACATGG
ATAA

Upstream 100 bases:

>100_bases
CTTATGTGGAGCCTCAATAAATGGGAAGCTCTCAACAGCATTGAGATGGAGATGCGACGTCGTGGAAGTGTTCAAGGATG
CAAGGCTGTAAAACAGGAGT

Downstream 100 bases:

>100_bases
ACAATACCTACACGAAAAGCTGGATGCCATGCGCCAGAATTTTGTTGAATCAACCCACCACGAACGATCGGTGGGCGTGC
TAGACCAAGCGCATATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKMKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQAGLTNAQLILQGHETL
DQFVTKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTA
AIYRTLNQVNNPPFLVMIEKLERYRHG

Sequences:

>Translated_187_residues
MKMKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQAGLTNAQLILQGHETL
DQFVTKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTA
AIYRTLNQVNNPPFLVMIEKLERYRHG
>Mature_187_residues
MKMKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQAGLTNAQLILQGHETL
DQFVTKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTA
AIYRTLNQVNNPPFLVMIEKLERYRHG

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21073; Mature: 21073

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQE
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHQAGLTNAQLILQGHETLDQFVTKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCG
HHHHCCCCCHHEEEECHHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHH
LLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAIYRTLNQVNNPPFLVMIEK
HHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHH
LERYRHG
HHHHCCC
>Mature Secondary Structure
MKMKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQE
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHQAGLTNAQLILQGHETLDQFVTKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCG
HHHHCCCCCHHEEEECHHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHH
LLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAIYRTLNQVNNPPFLVMIEK
HHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHH
LERYRHG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]