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The map label for this gene is ybaB [C]

Identifier: 116516611

GI number: 116516611

Start: 999729

End: 1000028

Strand: Reverse

Name: ybaB [C]

Synonym: SPD_0987

Alternate gene names: 116516611

Gene position: 1000028-999729 (Counterclockwise)

Preceding gene: 116516406

Following gene: 116516210

Centisome position: 48.87

GC content: 41.33

Gene sequence:

>300_bases
ATGATGAACATGCAAAACATGATGCGTCAAGCACAAAAACTTCAAAAACAAATGGAACAAAGCCAAGCTGAACTTGCTGC
TATGCAATTTGTTGGCAAATCTGCTCAAGATCTTGTCCAAGCGACCTTAACTGGCGATAAGAAAGTTGTCAGCATTGATT
TCAATCCAGCTGTCGTTGACCCAGAGGACCTTGAGACTCTTTCTGATATGACCGTTCAAGCCATCAACTCTGCTCTTGAA
CAAATCGATGAAACTACCAAGAAAAAACTGGGTGCTTTCGCTGGGAAATTACCTTTCTAA

Upstream 100 bases:

>100_bases
GCTTGATGGCTATGCTACTAATAACAATTAGGAGAGAAAATCAGGCACTTGTTAACAACAAGGATTATCCCCTTGAGATG
AAAGGAACTTTAGAAATCTT

Downstream 100 bases:

>100_bases
AAACAAGGAGCTAGAACAATGCTTGTCGATAACAAAGGCTAAGAAAGGTGCAAAAATGACTCTATAATATTTGTAGTGGG
TAAATCCACTATAGATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVDPEDLETLSDMTVQAINSALE
QIDETTKKKLGAFAGKLPF

Sequences:

>Translated_99_residues
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVDPEDLETLSDMTVQAINSALE
QIDETTKKKLGAFAGKLPF
>Mature_99_residues
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVDPEDLETLSDMTVQAINSALE
QIDETTKKKLGAFAGKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=105, Percent_Identity=30.4761904761905, Blast_Score=62, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1010_STRR6 (P67267)

Other databases:

- EMBL:   AE007317
- PIR:   B97998
- RefSeq:   NP_358604.1
- ProteinModelPortal:   P67267
- SMR:   P67267
- STRING:   P67267
- EnsemblBacteria:   EBSTRT00000015188
- GeneID:   933771
- GenomeReviews:   AE007317_GR
- KEGG:   spr:spr1010
- eggNOG:   COG0718
- GeneTree:   EBGT00050000027427
- HOGENOM:   HBG734215
- OMA:   KYTKGLM
- ProtClustDB:   PRK00153
- BioCyc:   SPNE171101:SPR1010-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 10936; Mature: 10936

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCC
PEDLETLSDMTVQAINSALEQIDETTKKKLGAFAGKLPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNMQNMMRQAQKLQKQMEQSQAELAAMQFVGKSAQDLVQATLTGDKKVVSIDFNPAVVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCC
PEDLETLSDMTVQAINSALEQIDETTKKKLGAFAGKLPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234