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The map label for this gene is yjbK [H]

Identifier: 116516210

GI number: 116516210

Start: 993887

End: 994456

Strand: Reverse

Name: yjbK [H]

Synonym: SPD_0981

Alternate gene names: 116516210

Gene position: 994456-993887 (Counterclockwise)

Preceding gene: 116516611

Following gene: 116517035

Centisome position: 48.6

GC content: 38.42

Gene sequence:

>570_bases
ATGAAACATTTAGAAATTGAATTGAAAACACTATTGAAAAAAGATGAATACAATCGTCTAAAAGACCAGTTCACAGGTGT
CACTCCTGTTCTTCAAACAAATTACTACATCGACACGCCTGATTTTGAACTGCGAGAAAAGAAAGTCGCTATGCGCATTC
GAACCTTTGAAGACTGGGCTGAGTTGACACTCAAAGTCCCGCAGAGTGTTGGAAACATGGAATACAACCAAAAATTGCAA
CTAAAAGATGCTGAGAACTATCTGAGTAAGGAAGAACTTCCTCAAGGGCTAGTACTGGATGAATTGGCGAAACATGGTAT
CCAAAGTAAGAACTGGCAGGTTCTTGGTTGTCTAACAACGCTTCGCTATGAAATGAAAACAGCTATTGGTCTCATGGCAC
TGGATCAGAGCCGATACTTTGATATAACAGATTACGAATTGGAGCTTGAAGTGGAAAATCATGAGCAAGGCAAACAGGAT
TTCCGACAATTTTTAGAGAAAAATCAGATTTCCTATCAAAAAGCTCCTTCAAAATTGGTTCGATTTGTCAAAAGTATGAA
AAATAGCTGA

Upstream 100 bases:

>100_bases
GTCAAAAATATCTTTGATTTTTTCTCCAGATTCATATACAATAAATACAATGCTTATTATACCATAAATCCGCTTTCAAC
GATAAAAAAAGGTAAGAAAA

Downstream 100 bases:

>100_bases
AATAATCTCCATTTTTTGGTAAAATAGAAAAGATAAAAATACACAAACCCTAGTTCATATATGTAAGGTAAATATAACTA
GGATTTATAAAGTTTACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQ
LKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTTLRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQD
FRQFLEKNQISYQKAPSKLVRFVKSMKNS

Sequences:

>Translated_189_residues
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQ
LKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTTLRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQD
FRQFLEKNQISYQKAPSKLVRFVKSMKNS
>Mature_189_residues
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQ
LKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTTLRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQD
FRQFLEKNQISYQKAPSKLVRFVKSMKNS

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 22348; Mature: 22348

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHH
ELTLKVPQSVGNMEYNQKLQLKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTT
HHHHHHHHHHCCCCCCCEEEEECHHHHHCHHHCCCCHHHHHHHHCCCCCCCCEEEHHHHH
LRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQDFRQFLEKNQISYQKAPSKLV
HHHHHHHHHHHHEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH
RFVKSMKNS
HHHHHHCCC
>Mature Secondary Structure
MKHLEIELKTLLKKDEYNRLKDQFTGVTPVLQTNYYIDTPDFELREKKVAMRIRTFEDWA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHH
ELTLKVPQSVGNMEYNQKLQLKDAENYLSKEELPQGLVLDELAKHGIQSKNWQVLGCLTT
HHHHHHHHHHCCCCCCCEEEEECHHHHHCHHHCCCCHHHHHHHHCCCCCCCCEEEHHHHH
LRYEMKTAIGLMALDQSRYFDITDYELELEVENHEQGKQDFRQFLEKNQISYQKAPSKLV
HHHHHHHHHHHHEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH
RFVKSMKNS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]