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The map label for this gene is 116516586

Identifier: 116516586

GI number: 116516586

Start: 986093

End: 986482

Strand: Direct

Name: 116516586

Synonym: SPD_0972

Alternate gene names: NA

Gene position: 986093-986482 (Clockwise)

Preceding gene: 116515413

Following gene: 116515714

Centisome position: 48.19

GC content: 39.23

Gene sequence:

>390_bases
ATGAAGGCTCAAGCGATTGTCACAAGTCAAGGGAGAATTGTTTCTTTGGATATCACTGTGAACTATTGTCATGATATGAA
GTTGTTCAAAATGAGTTGCAGAAATATCGGACAAGCTGGTAAAATCTTGGCTGACAGTGGTTATCAAGGGCTCATGAAGA
TATATCCTCAAGCACAAACTCCACGTAAATCCAGCAAACTCAAGCCGCTAACAGCTGAAGATAAAGCCTGTAACCATGCG
CTATCCAAGGAGAGAAGCAAGGTTGAGAACATCTTTGCCAAAGTAAAAACGTTTAAAATGTTTTCAACAACCTATCGAAA
TCATCGTAAACGCTTCGGATTACGAATGAATTTGAGTGCTGGTATTATCAATCATGAACTAGGATTCTAG

Upstream 100 bases:

>100_bases
TCAGTTCTGAGGCCACGGTAATGATTGATGCGACGGAAGTAAAAATCAATCGCCCTAAAAAAAGAATTAGCGAATTATTC
TTGTAAAAAAATGCCACGCT

Downstream 100 bases:

>100_bases
TTTTGCAGGAAGTCTATTGAGGTATTGAGCTAGTTTATGAAAAAATTGGGTGAAAAGTCGAGTGTTTTAGAAACCCACAG
TGTAGTATTCTAGTTTCAAT

Product: IS1381, transposase OrfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQTPRKSSKLKPLTAEDKACNHA
LSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSAGIINHELGF

Sequences:

>Translated_129_residues
MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQTPRKSSKLKPLTAEDKACNHA
LSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSAGIINHELGF
>Mature_129_residues
MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQTPRKSSKLKPLTAEDKACNHA
LSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSAGIINHELGF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 14598; Mature: 14598

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQT
CCCCEEEECCCEEEEEEEEEECHHCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCC
PRKSSKLKPLTAEDKACNHALSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GIINHELGF
CCCCCCCCC
>Mature Secondary Structure
MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQT
CCCCEEEECCCEEEEEEEEEECHHCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCC
PRKSSKLKPLTAEDKACNHALSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLSA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GIINHELGF
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]