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The map label for this gene is lrp [H]

Identifier: 116516580

GI number: 116516580

Start: 528890

End: 529774

Strand: Direct

Name: lrp [H]

Synonym: SPD_0517

Alternate gene names: 116516580

Gene position: 528890-529774 (Clockwise)

Preceding gene: 116515371

Following gene: 116515354

Centisome position: 25.85

GC content: 43.73

Gene sequence:

>885_bases
ATGAGGGAAAAAGAACTACAAGACTGGTTTCCTGAGGCTCGGATTTCAGACCAACCAGTAGAGAAAGAGGGCTATCTCAC
GCTCCCTTTAGCTTCTCAGCAGTGGATTTTGCTGGAGGAAGCTGGGCTCAGCGAGCGTGAAAAGCAGTTGGTTGCCCTTT
TGACCCAGCAGGAGCAGGCTCGTTCGCTAAACCCTTGGTATTCCTATCTGGTTGAAGGCAAGGGACAGGCACCGCAAGTT
TTTAAAAAGATTCAGTTGGTTTATTGCCATCTTTCTTATTTTCAGCAGGAAAATCTGGCTTCTTGGCTAGATATGATGCG
GACTCTTTTTCCGAATTGTCAGACAGTGCTACAGGTCGGATCTCAGGATTATGTTTTCGTGCTTCAACAAGACAAATACA
CTTCTGTAAGAGATATTTTAAGTGATACGATTGAAGCGGTTGAGTATGACTTTGGACTTCGTCTTTCTATCATGTTGGGT
CAGGTTTGGTCTCAGACGGGACATCAAGCCCTATCAGACTTAATCAAAGCTGAGCGGGATTTGTTCAAGACATGGTGGCG
TCAGGGTCACCAAGGTGTTCATACTTTTTCTCAGCTCTATCTTTGGAGTATGGGAGAAAGACTCGTGGACTTGAAGCCAA
TCAAGGAATGTCTACACCAGATGATTTTGGATCAAGATCAGATTCAGGAAATCATTCTCTCTCTTTGGGAAAATAGTGCT
GTTCTCACTAAAACAGCCCAGCAACTCTATCTGCACCGCAATTCTCTCCAATACAAGATTGATAAATGGGAAGAGTTGAC
AGGGCTTCAGTTGAAAGAGTTGACCGACCTGACCTTGTGTTATCAATTGATTTTAGGTTCTTTGTCAACTATAGTTGGTT
TGTAA

Upstream 100 bases:

>100_bases
GGGATTTGAAGCGGTTATGGGCTATCTCCATATGACTGAGAATCTGGAACGTCTTGAGAGTTTGGTTTCATGGTGCATCC
AAAAAGTGGAGGGCTAGAAC

Downstream 100 bases:

>100_bases
AGAAGTTAATATTTGGAGAAGAGGATTGCCATCTTCTCCATTTTTATGTGCAGAGTTATAGTGGCTTGATGCTGGGAAAG
TACACTGTGACTGCTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MREKELQDWFPEARISDQPVEKEGYLTLPLASQQWILLEEAGLSEREKQLVALLTQQEQARSLNPWYSYLVEGKGQAPQV
FKKIQLVYCHLSYFQQENLASWLDMMRTLFPNCQTVLQVGSQDYVFVLQQDKYTSVRDILSDTIEAVEYDFGLRLSIMLG
QVWSQTGHQALSDLIKAERDLFKTWWRQGHQGVHTFSQLYLWSMGERLVDLKPIKECLHQMILDQDQIQEIILSLWENSA
VLTKTAQQLYLHRNSLQYKIDKWEELTGLQLKELTDLTLCYQLILGSLSTIVGL

Sequences:

>Translated_294_residues
MREKELQDWFPEARISDQPVEKEGYLTLPLASQQWILLEEAGLSEREKQLVALLTQQEQARSLNPWYSYLVEGKGQAPQV
FKKIQLVYCHLSYFQQENLASWLDMMRTLFPNCQTVLQVGSQDYVFVLQQDKYTSVRDILSDTIEAVEYDFGLRLSIMLG
QVWSQTGHQALSDLIKAERDLFKTWWRQGHQGVHTFSQLYLWSMGERLVDLKPIKECLHQMILDQDQIQEIILSLWENSA
VLTKTAQQLYLHRNSLQYKIDKWEELTGLQLKELTDLTLCYQLILGSLSTIVGL
>Mature_294_residues
MREKELQDWFPEARISDQPVEKEGYLTLPLASQQWILLEEAGLSEREKQLVALLTQQEQARSLNPWYSYLVEGKGQAPQV
FKKIQLVYCHLSYFQQENLASWLDMMRTLFPNCQTVLQVGSQDYVFVLQQDKYTSVRDILSDTIEAVEYDFGLRLSIMLG
QVWSQTGHQALSDLIKAERDLFKTWWRQGHQGVHTFSQLYLWSMGERLVDLKPIKECLHQMILDQDQIQEIILSLWENSA
VLTKTAQQLYLHRNSLQYKIDKWEELTGLQLKELTDLTLCYQLILGSLSTIVGL

Specific function: Not essential for viability or growth. Nevertheless, uncontrolled production in E.coli is detrimental to the normal physiology of the bacteria [H]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34350; Mature: 34350

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKELQDWFPEARISDQPVEKEGYLTLPLASQQWILLEEAGLSEREKQLVALLTQQEQA
CCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
RSLNPWYSYLVEGKGQAPQVFKKIQLVYCHLSYFQQENLASWLDMMRTLFPNCQTVLQVG
HCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SQDYVFVLQQDKYTSVRDILSDTIEAVEYDFGLRLSIMLGQVWSQTGHQALSDLIKAERD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKTWWRQGHQGVHTFSQLYLWSMGERLVDLKPIKECLHQMILDQDQIQEIILSLWENSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
VLTKTAQQLYLHRNSLQYKIDKWEELTGLQLKELTDLTLCYQLILGSLSTIVGL
HHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MREKELQDWFPEARISDQPVEKEGYLTLPLASQQWILLEEAGLSEREKQLVALLTQQEQA
CCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
RSLNPWYSYLVEGKGQAPQVFKKIQLVYCHLSYFQQENLASWLDMMRTLFPNCQTVLQVG
HCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SQDYVFVLQQDKYTSVRDILSDTIEAVEYDFGLRLSIMLGQVWSQTGHQALSDLIKAERD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKTWWRQGHQGVHTFSQLYLWSMGERLVDLKPIKECLHQMILDQDQIQEIILSLWENSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
VLTKTAQQLYLHRNSLQYKIDKWEELTGLQLKELTDLTLCYQLILGSLSTIVGL
HHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8232196; 2989113 [H]