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The map label for this gene is 116516521

Identifier: 116516521

GI number: 116516521

Start: 116230

End: 117582

Strand: Direct

Name: 116516521

Synonym: SPD_0115

Alternate gene names: NA

Gene position: 116230-117582 (Clockwise)

Preceding gene: 116516334

Following gene: 116515891

Centisome position: 5.68

GC content: 34.37

Gene sequence:

>1353_bases
ATGAAATTATATAATAAATCAGAATTACGTTATTCTCGCATTTTCTTTGATAAGAGACCACCAGCTTTTGCGTTTATTCT
CATTATTTCAACTGCTATTATCTTAAGCGGTGCATTGGTTGGCGCAGCTTATATACCCAAAAACTATATTGTAAAAGCGA
ATGGAAATTCAGTCATAACAGGTACAGAGTTCCTATCAGCAATTAGTTCAGGGAAGGTAGTTACTTTACATAAGTCAGAA
GGAGATATGGTAAATGCTGGAGATGTCATTATTTCGTTATCAAGTGGACAAGAAGGTTTACAAGCGAGCTCTTTAAATAA
ACAATTGGTGAAGTTACGTGCAAAAGAAGCTATCTTTCAAAAATTTGAACAATCATTAAATGAGAAATACAACCGTATGT
CTAATTCTGGTGAAGAACAGGAATATTATGGGAAAGTTGAATACTACCTATCTCAGTTAAATTCGGAAAATTATAATAAT
GGTACCCAGTATTCAAAGATTCAGGATGAATATACGAAGTTGAATAAAATAACAGCTGAAAGAAATCAGTTAGATGCCGA
CTTGCAAACTCTACAAAATGAATTGATTCAACTTCAACAGCAAGGAGACTCCCCTTCCTTATCAGATACGACATCAGCTG
ATGATAAAGCTAAGTTAGAAACTAAGATATTAGAAATAACAACAAAAATCGAAGCATTAAAAACAAATATTACTTCTAAG
AATAGCGAGATTGATAGTCAACAAAGCAATATTAAAGATATGAACCGTACCTATAATGATCCAACTTCTCAGGCTTATAA
TATTTATGCTCAATTAGTTAGTGAGTTAGGTACTGCTCGTTCAAACAACAATAAAAGTATTACAGAGCTTGAGGCTAATC
TTGGAGTGGCAACAGGTCAAGATAAAGCTCATAGTATATTAGCGCCAAATGAAGGTACTCTGCATTATTTGGTACCTTTG
AAACAAGGAATGTCTATTCAGCAGGGGCAAACGATAGCAGAAGTTTCAGGGAAAGAAAAAGGTTACTATGTAGAAGCTTT
TGTACTTGCGAGTGATATTTCTCGTGTCTCAAAAGGAGCAAAAGTTGATGTTGCTATTACTGGTGTAAATAGTCAAAAAT
ATGGAACACTAAAGGGACAAGTCAGACAGATTGATTCAGGAACAATTTCCCAAGAAACGAAAGAGGGGAATATTAGCCTC
TATAAAGTCATGATAGAATTAGAAACCTTAACTCTAAAACATGGAAGTGAGACAGTCGTCCTCCAAAAGGATATGCCAGT
TGAAGTGCGGATTGTCTATGATAAAGAAACCTATCTTGATTGGATTTTGGAAATGTTAAGTTTCAAGCAATAA

Upstream 100 bases:

>100_bases
ATGAAAATGATATTCAAACGGATGGGATTGTCTATACAGTTTATGTTAATTCTTCTCCTGAAAAAATGGTAGTAGATATT
TTTATACCAATTGTAAGCCT

Downstream 100 bases:

>100_bases
TTGGTTTTAAACATTAAGTCACCTATAAAATAAAGTAAGATAAAGGAAAGATATCTTATCTAGGTAACTAAGTGCTATAA
ACAAAGTCAACGATCACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacteriocin ABC Transporter; Type I Secretion Membrane Fusion Protein HlyD; Type I Secretion Membrane Fusion Protein HlyD Family; HlyD Family Secretion Protein; Secretion Protein

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSE
GDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNN
GTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSK
NSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPL
KQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISL
YKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ

Sequences:

>Translated_450_residues
MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSE
GDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNN
GTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSK
NSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPL
KQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISL
YKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ
>Mature_450_residues
MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSE
GDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNN
GTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSK
NSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPL
KQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISL
YKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49983; Mature: 49983

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVIT
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCEEEE
GTEFLSAISSGKVVTLHKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQ
HHHHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQ
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHCCCEECCC
DKAHSILAPNEGTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGA
CCCCEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHCCCC
KVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVV
EEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCEEE
LQKDMPVEVRIVYDKETYLDWILEMLSFKQ
EECCCCEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVIT
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCEEEE
GTEFLSAISSGKVVTLHKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQ
HHHHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQ
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHCCCEECCC
DKAHSILAPNEGTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGA
CCCCEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHCCCC
KVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVV
EEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCEEE
LQKDMPVEVRIVYDKETYLDWILEMLSFKQ
EECCCCEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA