| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516334
Identifier: 116516334
GI number: 116516334
Start: 115766
End: 116233
Strand: Direct
Name: 116516334
Synonym: SPD_0114
Alternate gene names: NA
Gene position: 115766-116233 (Clockwise)
Preceding gene: 116516947
Following gene: 116516521
Centisome position: 5.66
GC content: 29.91
Gene sequence:
>468_bases ATGGCTAAGTTAGAGGTAAAAGATAATAAAAAACTGGTACTAAAGTCAGTTATCTGTAAAAAGTTACATGATACAAAAGT AGAAGATGTAGATCAGGAAATTAATAGATTTCATCAACATTTGCAGTTGTTAAAAGCACAAATTTTTGGTCCATTAATTG TAAAAAGTTGTGGTACTACTATTCATGATGATGGATTAATAACGACTGATTTTGAGTTTTATATTCAAGCTCATAATGCT CAACAGTACAGTAACATTTATGATGTACAGGATTCCATCTCTGTTCCATATTGTTTATATGTTCGTTTTGAAGACAGTCC AGAGTATCTACAGTATGCGTATTCTAAATTGGATCTATATGTCTATGAAAATGATATTCAAACGGATGGGATTGTCTATA CAGTTTATGTTAATTCTTCTCCTGAAAAAATGGTAGTAGATATTTTTATACCAATTGTAAGCCTATGA
Upstream 100 bases:
>100_bases GCGAAAAATGGAAAGTATGCTAGAATGGTTGGTTTGCAGAGCGTTCAAGTGAATCAACAAATTCAGTCACAGGCTGTGTT AGATACAGAGGAGGTTACTT
Downstream 100 bases:
>100_bases AATTATATAATAAATCAGAATTACGTTATTCTCGCATTTTCTTTGATAAGAGACCACCAGCTTTTGCGTTTATTCTCATT ATTTCAACTGCTATTATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTTIHDDGLITTDFEFYIQAHNA QQYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLYVYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL
Sequences:
>Translated_155_residues MAKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTTIHDDGLITTDFEFYIQAHNA QQYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLYVYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL >Mature_154_residues AKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTTIHDDGLITTDFEFYIQAHNAQ QYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLYVYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17980; Mature: 17849
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTT CCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IHDDGLITTDFEFYIQAHNAQQYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLY ECCCCEEEECCEEEEEECCCHHHHHEECCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEE VYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL EEECCCCCCCEEEEEEECCCCCEEEEEEEEEHHCC >Mature Secondary Structure AKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTT CEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IHDDGLITTDFEFYIQAHNAQQYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLY ECCCCEEEECCEEEEEECCCHHHHHEECCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEE VYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL EEECCCCCCCEEEEEEECCCCCEEEEEEEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA