| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516405
Identifier: 116516405
GI number: 116516405
Start: 493079
End: 493894
Strand: Direct
Name: 116516405
Synonym: SPD_0484
Alternate gene names: NA
Gene position: 493079-493894 (Clockwise)
Preceding gene: 116515755
Following gene: 116515503
Centisome position: 24.1
GC content: 38.6
Gene sequence:
>816_bases ATGATAAGGTGCAAAAAAGAAATAAGGAGTTTGTATATGGCTGAACAAGACTTAGCTATGCAAGTATTGCAACAAGTGGT GAAACTACCTGTTGTTAAGGTTGATCGTTCGAAATTTTTAGTGGATAAGTTTTCCAAAGAATTGGATCCAAAAGATATTC CTACCTTATTGGAACAAGGTCCAACGACTCTTCTATCTCAAGAAATATTAGATCGTGTAGCTAATGCTTGTATTCGGGAC AATGTATTATTAGCGAGTGGGACTTCTGTTTTGGCAGGATTACCTGGAGGGCTTGCTATGGCAATTACCATTCCAGCTGA TGTGGCTCAATTTTATGCTTTCTCTCTGAAATTGGCTCAAGAATTAGGTTATATTTATGGTTATGAGGATCTTTGGGCTT CACGAGAGGAGTTGAGTGAAGATGCTCAAAATACCCTCTTGCTTTATCTAGGCGTAATGTTAGGGGTGAATGGAACCGCT GCTTTGCTACGTGCTGGTGGTATAACAATTGCCAAACAGGTAATGAAAACAGTGCCTAATAAAGCTTTAACAAAGACGCT TTGGTACCCTATTTTGAAAAAAGTCTTAAAAATATTTGGTGTGAATCTTACCAAGGGAGGGTTGGCCAAAGGAATGGGGA AATTTATTCCTATCTTGGGTGGTATCATTTCAGGTGGTTTAACCTTTGCAACTATGAAACCGATGGGTGAAAGCTTGCAG AAAGAATTGTCCAAGCTAGTTAACTATAGTGAAGTTCAATATCAAGAAGATGTTGAAACAATCCGAAAAGAGGCTGAAAT CATCGAAGGAGAGTAA
Upstream 100 bases:
>100_bases TCGATTTGTCCTGTTCTTGTTTCATTTTAATATAAAAAAGGGATTCTGTATTTTTTAATGTTATCTAATTAGAAAATGCT TTTTTTGTAGGAAATATAAT
Downstream 100 bases:
>100_bases TATGGGACTCATAAAAACTCTAGCTAAAATTTATGGTAATTACTTTTTGACCGTGCAAGGTGTAAAAGTAATGAAAACGA TAAAGAAAGATGATAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ KELSKLVNYSEVQYQEDVETIRKEAEIIEGE
Sequences:
>Translated_271_residues MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ KELSKLVNYSEVQYQEDVETIRKEAEIIEGE >Mature_271_residues MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ KELSKLVNYSEVQYQEDVETIRKEAEIIEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29699; Mature: 29699
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCHHHHHHHCC PTTLLSQEILDRVANACIRDNVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQ CHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH ELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTAALLRAGGITIAKQVMKTVPN HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCH KALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KELSKLVNYSEVQYQEDVETIRKEAEIIEGE HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCHHHHHHHCC PTTLLSQEILDRVANACIRDNVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQ CHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH ELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTAALLRAGGITIAKQVMKTVPN HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCH KALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KELSKLVNYSEVQYQEDVETIRKEAEIIEGE HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA