Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

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The map label for this gene is 116516405

Identifier: 116516405

GI number: 116516405

Start: 493079

End: 493894

Strand: Direct

Name: 116516405

Synonym: SPD_0484

Alternate gene names: NA

Gene position: 493079-493894 (Clockwise)

Preceding gene: 116515755

Following gene: 116515503

Centisome position: 24.1

GC content: 38.6

Gene sequence:

>816_bases
ATGATAAGGTGCAAAAAAGAAATAAGGAGTTTGTATATGGCTGAACAAGACTTAGCTATGCAAGTATTGCAACAAGTGGT
GAAACTACCTGTTGTTAAGGTTGATCGTTCGAAATTTTTAGTGGATAAGTTTTCCAAAGAATTGGATCCAAAAGATATTC
CTACCTTATTGGAACAAGGTCCAACGACTCTTCTATCTCAAGAAATATTAGATCGTGTAGCTAATGCTTGTATTCGGGAC
AATGTATTATTAGCGAGTGGGACTTCTGTTTTGGCAGGATTACCTGGAGGGCTTGCTATGGCAATTACCATTCCAGCTGA
TGTGGCTCAATTTTATGCTTTCTCTCTGAAATTGGCTCAAGAATTAGGTTATATTTATGGTTATGAGGATCTTTGGGCTT
CACGAGAGGAGTTGAGTGAAGATGCTCAAAATACCCTCTTGCTTTATCTAGGCGTAATGTTAGGGGTGAATGGAACCGCT
GCTTTGCTACGTGCTGGTGGTATAACAATTGCCAAACAGGTAATGAAAACAGTGCCTAATAAAGCTTTAACAAAGACGCT
TTGGTACCCTATTTTGAAAAAAGTCTTAAAAATATTTGGTGTGAATCTTACCAAGGGAGGGTTGGCCAAAGGAATGGGGA
AATTTATTCCTATCTTGGGTGGTATCATTTCAGGTGGTTTAACCTTTGCAACTATGAAACCGATGGGTGAAAGCTTGCAG
AAAGAATTGTCCAAGCTAGTTAACTATAGTGAAGTTCAATATCAAGAAGATGTTGAAACAATCCGAAAAGAGGCTGAAAT
CATCGAAGGAGAGTAA

Upstream 100 bases:

>100_bases
TCGATTTGTCCTGTTCTTGTTTCATTTTAATATAAAAAAGGGATTCTGTATTTTTTAATGTTATCTAATTAGAAAATGCT
TTTTTTGTAGGAAATATAAT

Downstream 100 bases:

>100_bases
TATGGGACTCATAAAAACTCTAGCTAAAATTTATGGTAATTACTTTTTGACCGTGCAAGGTGTAAAAGTAATGAAAACGA
TAAAGAAAGATGATAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD
NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA
ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ
KELSKLVNYSEVQYQEDVETIRKEAEIIEGE

Sequences:

>Translated_271_residues
MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD
NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA
ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ
KELSKLVNYSEVQYQEDVETIRKEAEIIEGE
>Mature_271_residues
MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQGPTTLLSQEILDRVANACIRD
NVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTA
ALLRAGGITIAKQVMKTVPNKALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ
KELSKLVNYSEVQYQEDVETIRKEAEIIEGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29699; Mature: 29699

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCHHHHHHHCC
PTTLLSQEILDRVANACIRDNVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQ
CHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
ELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTAALLRAGGITIAKQVMKTVPN
HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCH
KALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KELSKLVNYSEVQYQEDVETIRKEAEIIEGE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRCKKEIRSLYMAEQDLAMQVLQQVVKLPVVKVDRSKFLVDKFSKELDPKDIPTLLEQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCHHHHHHHCC
PTTLLSQEILDRVANACIRDNVLLASGTSVLAGLPGGLAMAITIPADVAQFYAFSLKLAQ
CHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
ELGYIYGYEDLWASREELSEDAQNTLLLYLGVMLGVNGTAALLRAGGITIAKQVMKTVPN
HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCH
KALTKTLWYPILKKVLKIFGVNLTKGGLAKGMGKFIPILGGIISGGLTFATMKPMGESLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KELSKLVNYSEVQYQEDVETIRKEAEIIEGE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA