| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516291
Identifier: 116516291
GI number: 116516291
Start: 1784672
End: 1785337
Strand: Reverse
Name: 116516291
Synonym: SPD_1789
Alternate gene names: NA
Gene position: 1785337-1784672 (Counterclockwise)
Preceding gene: 116517079
Following gene: 116516605
Centisome position: 87.25
GC content: 43.99
Gene sequence:
>666_bases GTGACGATTCTAGGAAAAGATACAGTTCAACAATCTGCGAAAGGTGAATCTGTAACTCAAGAAGCTACACCAGAGTATAA GCTAGAAAATACACCAGGTGGAGATAAGGGAGGCAATACTGGAAGCTCAGATGCTAATGCGAATGAAGGCGGTGGTAGCC AGGCGGGTGGATCAGCTCACACAGGTTCACAAAACTCAGCTCAATCACAAGCTTCTAAGCAATTAGCTACTGAAAAAGAA TCAGCTAAAAATGCCATTGAAAAAGCAGCCAAGAACAAGCAGGATGAAATCAAAGGCGCACCGCTTTCTGATAAAGAAAA AGCAGAACTTTTAGCAAGAGTGGAAGCAGAAAAACAAGCAGCTCTCAAAGAGATTGAAAATGCGAAAACTATGGAAGATG TGAAGGAAGCAGAAACGATTGGAGTGCAAGCCATTGCCATGGTTACAGTTCCTAAGAGACCAGTGGCTCCTAATGCTGCT CCTAAGACAACAAGTGCACCGCAAGCAACTGCAGGAACAATGCAAGATGTTACCTACCAGTCACCTGCTGGCAAACAATT ACCTAACACAGGTTCAGCATCAAGTGCAGCACTTGCTAGTCTTGGTCTAGTGGTGGCAACAAGTGGTTTTGCTTTGCTAG GAAGAAAGACTAGACGTAGAAAATAG
Upstream 100 bases:
>100_bases ACTGTCCTGATCGATTTGTCCTGTTATTATTTTATTTTACTATAAAGTTGAAGTAGCTGGAGATGGCACAGCGACAATCA CATTCCCAGATGGTTCAGTA
Downstream 100 bases:
>100_bases AACAGCTAGAAAATTCTATTCTCTACTTAAAGTTAGATTATAAGGGGGATTTTGAGAAGTCATCAATCCTAGTGATGGGT GAGAAAAGTGAGAACCCAAG
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTILGKDTVQQSAKGESVTQEATPEYKLENTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKE SAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAA PKTTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK
Sequences:
>Translated_221_residues MTILGKDTVQQSAKGESVTQEATPEYKLENTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKE SAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAA PKTTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK >Mature_220_residues TILGKDTVQQSAKGESVTQEATPEYKLENTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKES AKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAP KTTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22647; Mature: 22516
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILGKDTVQQSAKGESVTQEATPEYKLENTPGGDKGGNTGSSDANANEGGGSQAGGSAH CCCCCCHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGSQNSAQSQASKQLATEKESAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHH ALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAPKTTSAPQATAGTMQDVTYQ HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC SPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHCCC >Mature Secondary Structure TILGKDTVQQSAKGESVTQEATPEYKLENTPGGDKGGNTGSSDANANEGGGSQAGGSAH CCCCCHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGSQNSAQSQASKQLATEKESAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHH ALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAPKTTSAPQATAGTMQDVTYQ HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC SPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA