| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516200
Identifier: 116516200
GI number: 116516200
Start: 422334
End: 422681
Strand: Reverse
Name: 116516200
Synonym: SPD_0421
Alternate gene names: NA
Gene position: 422681-422334 (Counterclockwise)
Preceding gene: 116515513
Following gene: 116516092
Centisome position: 20.66
GC content: 31.61
Gene sequence:
>348_bases ATGGCTCAACAATCATGTTGCAAAGCAAATATGAACAAACAACCTCCCTTAAGTTTATGCGAATCCTTGTACTCATTTGA GAATCTGACCGTTTTAGTAGTCCCTATTGAGTATGTGTTAGGAATGAAGATGATGAGTATCAGAGAGCAGGATTTGCAAG ATATTGGTGCAATTATTAAATACAAAAACTTTCATTCACCATTCGATACCTTTAAATATTTAAAAGACATGGGATTTGAT ACTATTGACCTCTCTGTTCTATTAGAAGGTTTTAGTTATGCTTATGGTATGGATTGGTTAGAAAAATTTTTTAAAGAAAA TCAAGATAAACTTCGCGAATTTTATTAA
Upstream 100 bases:
>100_bases CCACACAAGATGTTGATGCTTTTTATGACCAAAATCAGAAAATCAATGAAATTATTGCTCGTGTAGGAAAACAGTTTAAT CTTAACATCCACGAAGAGTT
Downstream 100 bases:
>100_bases CAGTATCAAACAAGATGATTGTCAATTAGCCCGTCGTCTTATTTTTATGATGGAATGAAATAAAATCGGAACAAATCACT TAGAGAATTCCAGTCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAQQSCCKANMNKQPPLSLCESLYSFENLTVLVVPIEYVLGMKMMSIREQDLQDIGAIIKYKNFHSPFDTFKYLKDMGFD TIDLSVLLEGFSYAYGMDWLEKFFKENQDKLREFY
Sequences:
>Translated_115_residues MAQQSCCKANMNKQPPLSLCESLYSFENLTVLVVPIEYVLGMKMMSIREQDLQDIGAIIKYKNFHSPFDTFKYLKDMGFD TIDLSVLLEGFSYAYGMDWLEKFFKENQDKLREFY >Mature_114_residues AQQSCCKANMNKQPPLSLCESLYSFENLTVLVVPIEYVLGMKMMSIREQDLQDIGAIIKYKNFHSPFDTFKYLKDMGFDT IDLSVLLEGFSYAYGMDWLEKFFKENQDKLREFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13527; Mature: 13396
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQSCCKANMNKQPPLSLCESLYSFENLTVLVVPIEYVLGMKMMSIREQDLQDIGAIIK CCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YKNFHSPFDTFKYLKDMGFDTIDLSVLLEGFSYAYGMDWLEKFFKENQDKLREFY HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure AQQSCCKANMNKQPPLSLCESLYSFENLTVLVVPIEYVLGMKMMSIREQDLQDIGAIIK CCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YKNFHSPFDTFKYLKDMGFDTIDLSVLLEGFSYAYGMDWLEKFFKENQDKLREFY HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA