| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516072
Identifier: 116516072
GI number: 116516072
Start: 1630317
End: 1630613
Strand: Reverse
Name: 116516072
Synonym: SPD_1616
Alternate gene names: NA
Gene position: 1630613-1630317 (Counterclockwise)
Preceding gene: 116515361
Following gene: 116515595
Centisome position: 79.69
GC content: 27.95
Gene sequence:
>297_bases ATGGTAAAGATAAATAAAATTTGTTCGATACAAGGAAGTTCCGTAGAAAATGAGGATATTGTAGGTTCACAAAATCAGTA TTTTTGGATTATTGGTGGAGCTACAGATTTATATAATTCTAAAGAGGAGATAGGTTATTCAGTCTCAGAAGTTGTACATA TTTTATCAGAAAGTTTGTCGGTTAATTGTAAAGAATCAAAAACTCTTAAACAAATATTTGAAACTGCTTTACTCGAGGTT AAAGATGAAATCGGTTTAAACTCATATGAATTAACAGAGTATAATAAAATGAAATAA
Upstream 100 bases:
>100_bases AAACAAAAATTACCAAAGACTGGTTCGAACAAGATTATGGAACTATTCTTAACAGTGACAGGAATTGGTTTACTTTTGAC ACTAAAAGGGTTGAAGTATT
Downstream 100 bases:
>100_bases TAATAGGACAAATCAATCAGGACAGTCAAATCGATTTCTAACAATGTTTTAGAAGTAGAGGTGTACTATTCTAGTTTCAA TATACTATATTATCGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MVKINKICSIQGSSVENEDIVGSQNQYFWIIGGATDLYNSKEEIGYSVSEVVHILSESLSVNCKESKTLKQIFETALLEV KDEIGLNSYELTEYNKMK
Sequences:
>Translated_98_residues MVKINKICSIQGSSVENEDIVGSQNQYFWIIGGATDLYNSKEEIGYSVSEVVHILSESLSVNCKESKTLKQIFETALLEV KDEIGLNSYELTEYNKMK >Mature_98_residues MVKINKICSIQGSSVENEDIVGSQNQYFWIIGGATDLYNSKEEIGYSVSEVVHILSESLSVNCKESKTLKQIFETALLEV KDEIGLNSYELTEYNKMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11044; Mature: 11044
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKINKICSIQGSSVENEDIVGSQNQYFWIIGGATDLYNSKEEIGYSVSEVVHILSESLS CCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHCCCHHHHCCCHHHHHHHHHHHHC VNCKESKTLKQIFETALLEVKDEIGLNSYELTEYNKMK CCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC >Mature Secondary Structure MVKINKICSIQGSSVENEDIVGSQNQYFWIIGGATDLYNSKEEIGYSVSEVVHILSESLS CCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHCCCHHHHCCCHHHHHHHHHHHHC VNCKESKTLKQIFETALLEVKDEIGLNSYELTEYNKMK CCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA