| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515979
Identifier: 116515979
GI number: 116515979
Start: 8582
End: 8950
Strand: Direct
Name: 116515979
Synonym: SPD_0008
Alternate gene names: NA
Gene position: 8582-8950 (Clockwise)
Preceding gene: 116515542
Following gene: 116516840
Centisome position: 0.42
GC content: 34.69
Gene sequence:
>369_bases ATGTCTAAAAATATTGTACAATTGAATAATTCTTTTATTCAAAATGAATACCAACGTCGTCGCTACCTGATGAAAGAACG ACAAAAACGGAATCGTTTTATGGGAGGGGTATTGATTTTGATTATGCTATTATTTATCTTGCCAACTTTTAATTTAGCGC AGAGTTATCAGCAATTACTCCAAAGACGTCAGCAATTAGCAGACTTGCAAACTCAGTATCAAACTTTGAGTGATGAAAAG GATAAGGAGACAGCATTTGCTACCAAGTTGAAAGATGAAGATTATGCTGCTAAATATACACGAGCGAAGTACTATTATTC TAAGTCGAGGGAAAAAGTTTATACGATTCCTGACTTGCTTCAAAGGTGA
Upstream 100 bases:
>100_bases AAGTTGCTGCTTGTAAAAGTACTAGAGATGAAAGATAGTACAAAAAAAGAAGATGCAGCAGGAATGTATGAAATTATCAG TGAAACACGGGTAGAAGAAA
Downstream 100 bases:
>100_bases TAAAATGGAAAATTTATTAGACGTAATAGAGCAATTTTTGAGTTTGTCAGATGAAAAGCTGGAAGAATTGGCTGATAAAA ATCAATTATTGCGTTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Septum Formation Initiator Protein; Cell-Division Initiation Protein DivIC; Septum Formation Initiator Family Protein; Cell-Cycle Protein MesJ/Ycf62 Family
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEK DKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR
Sequences:
>Translated_122_residues MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEK DKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR >Mature_121_residues SKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEKD KETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14805; Mature: 14674
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECHHHHH QR CC >Mature Secondary Structure SKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECHHHHH QR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA