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The map label for this gene is hslR [C]

Identifier: 116515542

GI number: 116515542

Start: 8323

End: 8589

Strand: Direct

Name: hslR [C]

Synonym: SPD_0007

Alternate gene names: 116515542

Gene position: 8323-8589 (Clockwise)

Preceding gene: 116516151

Following gene: 116515979

Centisome position: 0.41

GC content: 34.83

Gene sequence:

>267_bases
ATGAGATTAGATAAATATTTAAAAGTATCGCGAATTATCAAGCGTCGTACAGTCGCAAAGGAAGTAGCAGATAAAGGTAG
AATCAAGGTTAATGGAATCTTGGCCAAAAGTTCAACGGACTTGAAAGTTAATGACCAAGTTGAAATTCGCTTTGGCAATA
AGTTGCTGCTTGTAAAAGTACTAGAGATGAAAGATAGTACAAAAAAAGAAGATGCAGCAGGAATGTATGAAATTATCAGT
GAAACACGGGTAGAAGAAAATGTCTAA

Upstream 100 bases:

>100_bases
TTTATTAGAGATAAAAGAGTCTAAGGAAAAAAATTCCATTTGATATTTTTCTTCTATAAAATAGATAAAAATGGTACAAT
AATAAATTGAGGTAATAAGG

Downstream 100 bases:

>100_bases
AAATATTGTACAATTGAATAATTCTTTTATTCAAAATGAATACCAACGTCGTCGCTACCTGATGAAAGAACGACAAAAAC
GGAATCGTTTTATGGGAGGG

Product: S4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIIS
ETRVEENV

Sequences:

>Translated_88_residues
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIIS
ETRVEENV
>Mature_88_residues
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIIS
ETRVEENV

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y007_STRPN (P64405)

Other databases:

- EMBL:   AE005672
- PIR:   G95000
- RefSeq:   NP_344560.1
- ProteinModelPortal:   P64405
- SMR:   P64405
- EnsemblBacteria:   EBSTRT00000025311
- GeneID:   929744
- GenomeReviews:   AE005672_GR
- KEGG:   spn:SP_0007
- TIGR:   SP_0007
- GeneTree:   EBGT00050000027584
- HOGENOM:   HBG586251
- OMA:   TTKKEEA
- ProtClustDB:   CLSK2752070
- BioCyc:   SPNE170187-1:SP_0007-MONOMER
- InterPro:   IPR002942
- SMART:   SM00363

Pfam domain/function: PF01479 S4

EC number: NA

Molecular weight: Translated: 10065; Mature: 10065

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCEEEEEECCEEEEEEE
LEMKDSTKKEDAAGMYEIISETRVEENV
ECCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCEEEEEECCEEEEEEE
LEMKDSTKKEDAAGMYEIISETRVEENV
ECCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916